Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0087
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   3.0  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   3.0  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   3.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.2  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +2

Query: 419 LNLLLHCLISKNKTRKNNVDKAICYL*AKLGYAGFASKFIMF*INCNL 562
           L LL   L+      +   DK +C+  +  GY      F    IN NL
Sbjct: 5   LCLLASALLISTHQTEAKTDKILCFFASWAGYRNGEGSFKPQNINANL 52


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 248 DTESKHEFNESIINYQVKKKKCLTLY 171
           DTES ++FN+   N+  +  +  + Y
Sbjct: 199 DTESSYQFNDPQFNFNYQYNQAYSNY 224


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 248 DTESKHEFNESIINYQVKKKKCLTLY 171
           DTES ++FN+   N+  +  +  + Y
Sbjct: 219 DTESSYQFNDPQFNFNYQYNQAYSNY 244


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 273 CIFYLLCKLMYISCM 317
           CI+Y  C L+ + C+
Sbjct: 284 CIYYFYCALIILLCI 298


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 103 IYRTRRYIYLFYA 65
           I +T+RY Y +YA
Sbjct: 107 IKKTKRYCYYYYA 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,908
Number of Sequences: 336
Number of extensions: 3099
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)