Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0067
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    34   0.001
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.2  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   8.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
 Frame = +1

Query: 520 GYPTPEIFWYRGLNGPMVPYSSTLYEARENV---LLIRQLIDEALGEYACQAYNGEG--S 684
           G+P+P   WY+ + G     + TL +  + V   L+IR+   E  G+Y C   N  G  S
Sbjct: 258 GFPSPSFRWYKFVEGTTRKQAVTLNDRVKQVAGTLIIREAKVEDSGKYLCVVNNSVGGES 317

Query: 685 PATLLMEVRAYKQDDTPSDNKYLVSRPA 768
             T+L      K    P        RPA
Sbjct: 318 VETVLTVTAPLKAKIEPQVQTIDFGRPA 345



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 517 YGYPTPEIFWYR 552
           +G PTP+I W R
Sbjct: 48  HGNPTPDIIWVR 59



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 487 GQTARLARLVYGYPTPEIFW 546
           G +  L  +  G PTPEI W
Sbjct: 428 GNSVFLKCIASGNPTPEITW 447


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 210 CFFLFIIETHTILGTLKQ*Q 269
           C +LF+I T TI G L Q Q
Sbjct: 292 CLYLFLIITLTIYGLLSQLQ 311


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 283 LCPKRNPLFRIRINNINQQFVDAPLTNGDMTPK 381
           LC  +NPL  I   N+N   V  P  +    P+
Sbjct: 379 LCGPKNPLINILYANMNSYSVPEPTISTTPRPE 411


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 210 CFFLFIIETHTILGTLKQ 263
           C++ F +E +T+LG   Q
Sbjct: 121 CYYHFTLELYTVLGAACQ 138


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 210 CFFLFIIETHTILGTLKQ 263
           C++ F +E +T+LG   Q
Sbjct: 121 CYYHFTLELYTVLGAACQ 138


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 494 PLVLRASCTDTRPRK 538
           PLVLR SC    P++
Sbjct: 70  PLVLRGSCPQCTPQE 84


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 426 SNHAPFVSFTRVCEYFWCHIT 364
           SN   F+SF+++C Y   H++
Sbjct: 215 SNRRVFISFSKIC-YLHQHLS 234


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 304 LFRIRINNINQQFVDAPLTNGDM 372
           L R +I+N+N   + +   NGD+
Sbjct: 186 LIRNKISNLNTSLIHSTHLNGDI 208


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 426 SNHAPFVSFTRVCEYFWCHIT 364
           SN   F+SF+++C Y   H++
Sbjct: 233 SNRRVFISFSKIC-YLHQHLS 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,651
Number of Sequences: 336
Number of extensions: 4469
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)