Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0063
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.91 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.91 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.91 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.91 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.91 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.91 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    25   0.91 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.91 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.8  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.8  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.4  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   8.4  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   8.4  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 APQVHSRPVPCPQHGHGVQRT 404
           APQ    P   P  GHG+Q T
Sbjct: 49  APQYPQHPYAAPAPGHGLQPT 69


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 APQVHSRPVPCPQHGHGVQRT 404
           APQ    P   P  GHG+Q T
Sbjct: 49  APQYPQHPYAAPAPGHGLQPT 69


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 APQVHSRPVPCPQHGHGVQRT 404
           APQ    P   P  GHG+Q T
Sbjct: 49  APQYPQHPYAAPAPGHGLQPT 69


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 APQVHSRPVPCPQHGHGVQRT 404
           APQ    P   P  GHG+Q T
Sbjct: 49  APQYPQHPYAAPAPGHGLQPT 69


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 APQVHSRPVPCPQHGHGVQRT 404
           APQ    P   P  GHG+Q T
Sbjct: 49  APQYPQHPYAAPAPGHGLQPT 69


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 APQVHSRPVPCPQHGHGVQRT 404
           APQ    P   P  GHG+Q T
Sbjct: 49  APQYPQHPYAAPAPGHGLQPT 69


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 APQVHSRPVPCPQHGHGVQRT 404
           APQ    P   P  GHG+Q T
Sbjct: 49  APQYPQHPYAAPAPGHGLQPT 69


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 APQVHSRPVPCPQHGHGVQRT 404
           APQ    P   P  GHG+Q T
Sbjct: 49  APQYPQHPYAAPAPGHGLQPT 69


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
 Frame = -2

Query: 376 GHGTG--RLWT*GADESCWTGTSDPQIC 299
           GH T   R WT      CW GT+  Q+C
Sbjct: 107 GHETSCTRYWT------CWNGTATEQLC 128


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 224 LVCFIYLLCTLVLNKELYYYYC 289
           L+C  Y +  L     +YY+YC
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYC 151



 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 499 YHQQLRKL*FCGYDFYYTMLFLRRECTFYLHCVL 398
           Y+     L FC     +TM  L   C +Y +C L
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCAL 292



 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 224 LVCFIYLLCTLVLNKELYYY 283
           L+C  Y  C L++   +YY+
Sbjct: 282 LLCIYYFYCALIILLCIYYF 301



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 469 CGYDFYYTMLFLRRECTFYLH 407
           C Y FYY  + L   C +Y +
Sbjct: 99  CTYYFYYAFIILL--CVYYFY 117


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +3

Query: 345 PQVHSRPVPCPQHGHGVQRT 404
           PQ    P   P  GHG+Q T
Sbjct: 6   PQYPQHPYAAPAPGHGLQPT 25


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 309 GSDVPVQQLSSAPQVHSRPVPCPQHGHGVQRTQCK*NVHSRRRN 440
           G   P +  +S P   S  +   QHG+G  RT  + + +S   N
Sbjct: 8   GPPTPHESNTSTPVSKSAFIELQQHGYGPLRTSYQHHFNSPAGN 51


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 670 GGAAVVTILETLELISQGGWRI 605
           G A ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 565 TRWAVSSSTHISVDGRADSKTSYHQQLRK 479
           TR + SSSTH S    +DS  S     +K
Sbjct: 384 TRKSTSSSTHTSSQQTSDSFLSKRNSEKK 412


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 589 GHLQPKYATHLE 624
           GH  P YA+HL+
Sbjct: 219 GHYAPLYASHLD 230


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 589 GHLQPKYATHLE 624
           GH  P YA+HL+
Sbjct: 220 GHYAPLYASHLD 231


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 589 GHLQPKYATHLE 624
           GH  P YA+HL+
Sbjct: 220 GHYAPLYASHLD 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,899
Number of Sequences: 336
Number of extensions: 4944
Number of successful extensions: 29
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)