Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0050
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 541 Y*YSARLIFTLHLDFLM 591
           Y Y A +IFT+HL FL+
Sbjct: 148 YFYCAFIIFTVHLLFLL 164



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 541 Y*YSARLIFTLHLDF 585
           Y YSA +IFT+HL F
Sbjct: 214 YFYSAFIIFTIHLLF 228



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 541 Y*YSARLIFTLHLDFLM 591
           Y Y A +IFT+HL FL+
Sbjct: 115 YFYYAFIIFTVHLLFLL 131


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = +3

Query: 435 ERVHSYAIKKN*FLHRRSLYKNSLRIWDSACRVASILIQRAPYLYLTSGFSDAYGLR*QL 614
           +R  S +  KN      S +KN    ++  CR+   + +   Y+ L S  SD   +  QL
Sbjct: 250 DRTQSMSESKN---KSESAWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFILIQL 306

Query: 615 NARYREL 635
               R++
Sbjct: 307 FNSLRQM 313


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = +3

Query: 435 ERVHSYAIKKN*FLHRRSLYKNSLRIWDSACRVASILIQRAPYLYLTSGFSDAYGLR*QL 614
           +R  S +  KN      S +KN    ++  CR+   + +   Y+ L S  SD   +  QL
Sbjct: 250 DRTQSMSESKN---KSESAWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFILIQL 306

Query: 615 NARYREL 635
               R++
Sbjct: 307 FNSLRQM 313


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 17/67 (25%), Positives = 29/67 (43%)
 Frame = +3

Query: 435 ERVHSYAIKKN*FLHRRSLYKNSLRIWDSACRVASILIQRAPYLYLTSGFSDAYGLR*QL 614
           +R  S +  KN      S +KN    ++  CR+   + +   Y+ L S  SD   +  QL
Sbjct: 250 DRTQSMSESKN---KSESAWKNLREDYNRLCRLCKRVDEEISYIVLMSFASDLLFILIQL 306

Query: 615 NARYREL 635
               R++
Sbjct: 307 FNSLRQM 313


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 39  FLWTRVLKSATASPRKKAFF 98
           + WT +   A  SP K  FF
Sbjct: 59  YSWTEINAFANVSPSKTKFF 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,041
Number of Sequences: 336
Number of extensions: 3404
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)