Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0040
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.038
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   0.62 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.038
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +3

Query: 51  CFFWFFIIIISKLSVHYA*YRIPYLF*D*FLVLYAMLLMFVVHLIIIVCRIY 206
           C ++F+   I   ++H   Y +  +    +   YA +L F VHL+++VC  Y
Sbjct: 211 CIYYFYSAFII-FTIHLLFYCVLIILLCIYYFYYAFIL-FTVHLLLLVCIYY 260



 Score = 28.7 bits (61), Expect = 0.038
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = +3

Query: 30  YYC*L--KLCFFWFFIIIISKLSVHYA*YRIPYLF*D*FLVLYAMLLMFVVHLIIIVCRI 203
           +YC L   LC ++F+   I   +VH       Y F    L+     ++F +HL+ ++C  
Sbjct: 228 FYCVLIILLCIYYFYYAFIL-FTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIY 286

Query: 204 YLSST*LAM*C 236
           Y     + + C
Sbjct: 287 YFYCALIILLC 297



 Score = 27.9 bits (59), Expect = 0.066
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
 Frame = +3

Query: 27  YYYC*LKLCFFWF---FII----IISKLSVHYA*YRIPYLF*D*FLVLYAMLLMFVVHLI 185
           YY   + LC ++F   FII    ++  L ++Y  + +P  F       Y   ++F VHL+
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHLLFLLCIYY--FVVPLFFLLCIYYFYCAFIIFTVHLL 161

Query: 186 IIVC 197
            ++C
Sbjct: 162 FLLC 165



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 150 YAMLLMFVVHLIIIVCRIY 206
           Y   ++F VHL+ ++C  Y
Sbjct: 117 YYAFIIFTVHLLFLLCIYY 135



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 150 YAMLLMFVVHLIIIVCRIYLS 212
           Y + + F VHL+ ++C  Y +
Sbjct: 60  YCVSITFNVHLLFLLCSGYFT 80



 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 293 IYLFFFCFSTYFILEGGCCSIFFFEFLAWYL 385
           IY FF  F  + +    CC+  FF     +L
Sbjct: 166 IYHFFCAFIIFTMHLLFCCAFIFFNMHLLFL 196



 Score = 21.0 bits (42), Expect = 7.6
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 48  LCFFWFFIIIISKLSVHY 101
           LC ++F+  +I  L ++Y
Sbjct: 283 LCIYYFYCALIILLCIYY 300


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect(2) = 0.62
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 86  IKRALCLISYSLSFLRLVS 142
           +K A  LIS++L  +RL+S
Sbjct: 192 LKTAYYLISFALLIMRLIS 210



 Score = 21.4 bits (43), Expect(2) = 0.62
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 233 VSTPGYLCNVIISFLFSE 286
           VS+  Y C V+ SFL  +
Sbjct: 232 VSSSSYNCEVLFSFLIDQ 249


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 156 MLLMFVVHLIIIVCRIYLSS 215
           +LLMF  H I IV  I+  S
Sbjct: 237 LLLMFTSHFIFIVVSIFYMS 256


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +2

Query: 212 QYITCNVVSTPGYLCNVIISFLFSEL*IYLFFFCFSTYFILEGGCC--SIFFFEFL 373
           QYI  N+ +       ++ +F F  +   + F C+STY I   G    + FF  FL
Sbjct: 117 QYIDINLQNKGKKESKLMKNFYFWFVLKQVMFLCYSTYGIQVFGTMQRTSFFKTFL 172


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 299  LFFFCFSTYFIL 334
            LFFFC +  FI+
Sbjct: 979  LFFFCMAAEFII 990


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 299  LFFFCFSTYFIL 334
            LFFFC +  FI+
Sbjct: 979  LFFFCMAAEFII 990


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,111
Number of Sequences: 336
Number of extensions: 2232
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)