Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10d02
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -2

Query: 540  TNNWNSK--VATTTRDEQVASASVD 472
            TN+W +K   +TTTR     S  +D
Sbjct: 1180 TNHWQTKTTTSTTTRPTTTVSQLID 1204


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 220 HAPLNLTAPSRPIVL 264
           H PLNLT    PI +
Sbjct: 263 HKPLNLTIKKMPIAI 277


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 220 HAPLNLTAPSRPIVL 264
           H PLNLT    PI +
Sbjct: 155 HKPLNLTIKKMPIAI 169


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 402 KMRPNQRTILTTVTVL 449
           K RP+  TI++ VTV+
Sbjct: 224 KSRPSPATIISNVTVI 239


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 402 KMRPNQRTILTTVTVL 449
           K RP+  TI++ VTV+
Sbjct: 224 KSRPSPATIISNVTVI 239


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 402 KMRPNQRTILTTVTVL 449
           K RP+  TI++ VTV+
Sbjct: 544 KSRPSPATIISNVTVI 559


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,513
Number of Sequences: 336
Number of extensions: 3391
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)