Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c08
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.37 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.37 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.5  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 18/78 (23%), Positives = 40/78 (51%)
 Frame = +2

Query: 29  YRTATNNYHQSVERKILLSNHKY*IANTDKLIAIIETIQIFISHYIVL*FQFIEFSYPRV 208
           Y   T +  +  +RKILL    Y +     +I I   +Q+F+ HY V+  Q ++ +  + 
Sbjct: 198 YVCQTVSNFEYFQRKILLMIQLYYLYFD--VIVISTFLQLFLEHYEVINRQTLDTADVKT 255

Query: 209 KMSSADRIDFEMEVEVES 262
             +  ++  ++M+V +++
Sbjct: 256 LTTVVEKECYKMKVTIDA 273


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 18/78 (23%), Positives = 40/78 (51%)
 Frame = +2

Query: 29  YRTATNNYHQSVERKILLSNHKY*IANTDKLIAIIETIQIFISHYIVL*FQFIEFSYPRV 208
           Y   T +  +  +RKILL    Y +     +I I   +Q+F+ HY V+  Q ++ +  + 
Sbjct: 124 YVCQTVSNFEYFQRKILLMIQLYYLYFD--VIVISTFLQLFLEHYEVINRQTLDTADVKT 181

Query: 209 KMSSADRIDFEMEVEVES 262
             +  ++  ++M+V +++
Sbjct: 182 LTTVVEKECYKMKVTIDA 199


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 86  LTIIFSSLHFGDNYLSRY 33
           LT++F  +  G+++LSRY
Sbjct: 139 LTVVFMLIALGEHWLSRY 156


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 86  LTIIFSSLHFGDNYLSRY 33
           LT++F  +  G+++LSRY
Sbjct: 139 LTVVFMLIALGEHWLSRY 156


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 257 ESASSGPPIEVPNPTSP 307
           E A+S  P +VP P+SP
Sbjct: 50  EEAASPTPGDVPTPSSP 66


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 308 PGMLG*ALQSADLKMHSLLPLPFRNQFDQH 219
           PG  G A  +AD++ ++ L   FR  +DQH
Sbjct: 148 PGQRGGA--AADIQNYATLIKEFREVWDQH 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,183
Number of Sequences: 336
Number of extensions: 2488
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)