Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c01
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   5.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -1

Query: 141 HWQCSYSDHWRKYYFIFV 88
           +W+  Y D W +Y   F+
Sbjct: 121 YWRQQYEDFWHRYTLSFI 138


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -2

Query: 473 ALSGFDNSATPMPPFIENSFGHPILISIAATSCST 369
           A  G  N      P++  S  HP ++S+    C T
Sbjct: 841 AEGGCPNLYDARKPYVNGSEYHPSIVSLGEYKCVT 875


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -1

Query: 141 HWQCSYSDHWRKYYFIFVIHVYG 73
           HWQ      +R     FV+ +YG
Sbjct: 346 HWQIPLGRRFRALKLWFVLRLYG 368


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 713 FQFL*ILHCKHITIFYCIFFFH 648
           F +  IL   H+ +  CI++F+
Sbjct: 241 FYYAFILFTVHLLLLVCIYYFY 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,483
Number of Sequences: 336
Number of extensions: 3738
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)