Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10b12
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...   129   1e-32
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...   129   1e-32
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...   106   9e-26
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...   104   5e-25
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   2.5  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   2.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   2.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.7  

>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532



 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608



 Score =  129 bits (312), Expect = 1e-32
 Identities = 58/76 (76%), Positives = 69/76 (90%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684



 Score =  127 bits (306), Expect = 6e-32
 Identities = 57/76 (75%), Positives = 68/76 (89%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQR IFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440

Query: 376 IQKESTLHMVLRLRGG 423
           IQKESTLH+VLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score =  106 bits (255), Expect = 9e-26
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 376 IQKE 387
           IQKE
Sbjct: 61  IQKE 64


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score =  104 bits (249), Expect = 5e-25
 Identities = 46/64 (71%), Positives = 56/64 (87%)
 Frame = +1

Query: 196 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 375
           MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQR IFAGKQLED +T++DYN
Sbjct: 49  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108

Query: 376 IQKE 387
           IQKE
Sbjct: 109 IQKE 112



 Score = 89.8 bits (213), Expect = 1e-20
 Identities = 40/48 (83%), Positives = 45/48 (93%)
 Frame = +1

Query: 280 KIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 423
           KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/35 (22%), Positives = 15/35 (42%)
 Frame = +1

Query: 103 WVSAACCTVPPSVEAGAHSRQPLSFVSNSVKMQIF 207
           W+ A  C++P  V     S   +++    V   +F
Sbjct: 176 WLGATLCSIPQMVVFHVESHPNITWYQQCVTYNVF 210


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = -1

Query: 144 LHR--WWNRATGGRHPHHE 94
           +HR  WW+      +PHHE
Sbjct: 90  IHRPNWWHELETKFNPHHE 108


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/35 (22%), Positives = 15/35 (42%)
 Frame = +1

Query: 103 WVSAACCTVPPSVEAGAHSRQPLSFVSNSVKMQIF 207
           W+ A  C++P  V     S   +++    V   +F
Sbjct: 176 WLGATLCSIPQMVVFHVESHPNITWYQQCVTYNVF 210


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 324 YLCGQTIGRFQNYGRLQYSKGIY 392
           +LC  T+  FQNY    Y   +Y
Sbjct: 146 FLCRHTVEYFQNYIHFFYQLLLY 168


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 330 CGQTIGRFQNYGRLQYSKGIY 392
           CG  I R Q  G L+Y+KG Y
Sbjct: 416 CG--IRRVQQLGILRYAKGPY 434


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 330 CGQTIGRFQNYGRLQYSKGIY 392
           CG  I R Q  G L+Y+KG Y
Sbjct: 416 CG--IRRVQQLGILRYAKGPY 434


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 222 RQCFDEYLHFYTITYKRQRLPRMCPCLH 139
           RQ ++++ H YT+++       +  C H
Sbjct: 123 RQQYEDFWHRYTLSFIENYCQFLYNCFH 150


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -3

Query: 142 PPMVEPCNXXXXXXXXXTSPQRQLISTPV 56
           PP  EP +           P RQ + TPV
Sbjct: 90  PPPDEPIDDYEPSFDLFYYPSRQTLYTPV 118


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +1

Query: 103 WVSAACCTVPPSVEAGAHSRQPLSFVSN 186
           W+S+    VPP   +      P + +SN
Sbjct: 106 WLSSPSGNVPPLTPSPGPPSHPYTVISN 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,294
Number of Sequences: 336
Number of extensions: 2599
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)