Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10d11
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.22 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.30 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.2 bits (55), Expect = 0.22
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 377 KDDPPLPEDDENKEKRTDDISSWD 448
           K+   LPED+E K+KR +D + ++
Sbjct: 535 KEGLELPEDEEEKKKREEDKAKFE 558


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 362 WATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFEL 490
           W+ Y  + PP  + D  KEK  D I +   D LK  +  LF +
Sbjct: 321 WSNYCVE-PPCGQLDPTKEKLYDAIEALYGDMLKQFKPPLFHM 362


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 563 KGKTPEEIRKTFNIKNDF 616
           K + PE ++K +NI+N+F
Sbjct: 48  KVQVPEALKKIYNIQNNF 65


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 449 ADFLKVDQGTLFELI 493
           ADF ++D+GT F ++
Sbjct: 280 ADFFEIDRGTFFGIL 294


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 591 LRISSGVFPLIMFATVLHVTSNKPL 517
           L+I + V  ++    ++H TSNK L
Sbjct: 14  LKIITIVILVVATGNIIHTTSNKQL 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,741
Number of Sequences: 336
Number of extensions: 2634
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)