Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10d09
(654 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 25 0.41
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.2
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 2.2
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 23 2.9
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 23 2.9
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 23 2.9
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 23 2.9
AF260821-1|AAG02019.1| 134|Tribolium castaneum alpha-esterase l... 23 2.9
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 3.8
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 22 3.8
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 21 6.7
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 25.4 bits (53), Expect = 0.41
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -1
Query: 534 FSCTIPYKSPPVMWDPTLTFNGLNSQSTSL 445
F I PP +P +TFN LN T L
Sbjct: 167 FLAIIACMGPPPQPEPPVTFNSLNGAHTPL 196
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 23.0 bits (47), Expect = 2.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -3
Query: 205 IVTDTDQLVHSRSGHLFGSDDGSRY--GEDISE 113
I+T TDQ V +R+ F DD RY G ++S+
Sbjct: 13 ILTPTDQRVVTRTIPSFLRDDVERYPSGPELSD 45
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 413 IPKGINVPSLAREVDW 460
I G +VP LA+ +DW
Sbjct: 1569 IDAGYDVPVLAQNLDW 1584
Score = 21.0 bits (42), Expect = 8.9
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 413 IPKGINVPSLAREVDW 460
+ G +VP+L++ +DW
Sbjct: 1994 VDAGYDVPTLSKYLDW 2009
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -1
Query: 363 PSKMEPK-IPGPSSTDKGFPVR--STGSPT 283
P K P+ P PSST P + ST +PT
Sbjct: 66 PWKKSPQGAPSPSSTPSSLPTQRTSTSNPT 95
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 335 DQVLLTKAFQYGVLDHLQLHLKFLRIPG 252
D VL+T ++ G+L L+ + L +PG
Sbjct: 126 DVVLVTLNYRLGILGFLRFEDQSLGVPG 153
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 335 DQVLLTKAFQYGVLDHLQLHLKFLRIPG 252
D VL+T ++ G+L L+ + L +PG
Sbjct: 128 DVVLVTLNYRLGILGFLRFEDQSLGVPG 155
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 335 DQVLLTKAFQYGVLDHLQLHLKFLRIPG 252
D VL+T ++ G+L L+ + L +PG
Sbjct: 126 DVVLVTLNYRLGILGFLRFEDQSLGVPG 153
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 335 DQVLLTKAFQYGVLDHLQLHLKFLRIPG 252
D VL+T ++ G+L L+ + L +PG
Sbjct: 128 DVVLVTLNYRLGILGFLRFEDQSLGVPG 155
>AF260821-1|AAG02019.1| 134|Tribolium castaneum alpha-esterase like
protein E2 protein.
Length = 134
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 335 DQVLLTKAFQYGVLDHLQLHLKFLRIPG 252
D VL+T ++ G+L L+ + L +PG
Sbjct: 100 DVVLVTLNYRLGILGFLRFEDQSLGVPG 127
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 22.2 bits (45), Expect = 3.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 375 GR*IPSKMEPKIPGPSSTDKGFP 307
GR PS P+I PSST G P
Sbjct: 63 GRKSPSS--PRISSPSSTKSGSP 83
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 555 CWSRPKPREQLPISHRP 605
C SRPK +E P H P
Sbjct: 92 CTSRPKLQEPQPSQHCP 108
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 546 STGCWSRPKPREQLPISHRPGTTK 617
S G S P E LP+ PG K
Sbjct: 329 SDGATSEALPFELLPLDSEPGMLK 352
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,944
Number of Sequences: 336
Number of extensions: 3797
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -