Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b24
(675 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 24 1.3
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 3.0
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 22 5.3
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 21 7.0
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 7.0
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 7.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.2
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 9.2
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 21 9.2
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 9.2
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.8 bits (49), Expect = 1.3
Identities = 24/108 (22%), Positives = 45/108 (41%)
Frame = -3
Query: 631 FFYVVIIFNVCLCIIF*MFRYLKYL*FLFWNRSFFLH*VFWRGLSHNVMFFNF*AGLSQL 452
F+Y IIF V L + ++ ++ L FL F+ + + + F +
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIF------TVHLLFLLCIYHF 169
Query: 451 FT**VVIIYYLHLIFHSVTSWKGFMSIFS*YKLYFSLHIFIVDGLTFF 308
F II+ +HL+F + +F YF+LH+ + + +F
Sbjct: 170 FC--AFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYF 215
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +2
Query: 179 QNNDIDNACRLINRIMGKEGLLAQYRLTRYYEKPFQ 286
++N N CR+ + + L + T EKP++
Sbjct: 244 EDNQKPNVCRICGKSYARPSTLKTHLRTHSGEKPYR 279
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 21.8 bits (44), Expect = 5.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 540 IVVFFYIEFFGEVFLTMSCFSTF 472
IV F FFG + L FSTF
Sbjct: 83 IVRFMKYHFFGTLKLWSQLFSTF 105
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.4 bits (43), Expect = 7.0
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +2
Query: 197 NACRLINRIMGKEGLLAQYRLTRYYEKPFQTR 292
N C + +R++ + L + T E+PF+ +
Sbjct: 135 NQCVICHRVLSCKSALQMHYRTHTGERPFKCK 166
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.0
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 431 NLLFTFD--LSFSNILERVHVYFFLIQIVFFSPYLH 330
+L F D LS+ + ++ ++F+I VF S YLH
Sbjct: 276 HLCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLH 311
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -2
Query: 443 MSGYNLLFTFDLSFSNILERVHVYFFLIQIVFFSPYL 333
+ G + DLSF+NI +F +++ YL
Sbjct: 219 LGGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYL 255
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 48 DLRFCNTIRIESLEFFYPITVKCI 119
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 48 DLRFCNTIRIESLEFFYPITVKCI 119
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 48 DLRFCNTIRIESLEFFYPITVKCI 119
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 48 DLRFCNTIRIESLEFFYPITVKCI 119
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 48 DLRFCNTIRIESLEFFYPITVKCI 119
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 361 YKLYFSLHIFIVDGLTFFMVNSTSSLK 281
YK+Y + + LT +MV T++L+
Sbjct: 40 YKIYKYTYNIVAVSLTAYMVYITTNLR 66
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 361 YKLYFSLHIFIVDGL 317
+KLY +HIFI+ L
Sbjct: 25 FKLYTIVHIFIIIAL 39
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.0 bits (42), Expect = 9.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 558 FNFYSGIVVFFYIEFFGEVFLTMSCF 481
F++YS V + I G +F+T + F
Sbjct: 224 FSWYSKKVFYSKIIISGSIFMTTTSF 249
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,614
Number of Sequences: 336
Number of extensions: 3853
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -