Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b20
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 376 DVGQKTEYHDSQVDLHGHQYHHEYGVGYQHTS 281
           DV Q    H +  DL+ HQ HH+  + ++  S
Sbjct: 299 DVEQMNLLHSN--DLNMHQQHHQQNMSHEELS 328


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 14  WFNDKSQFRKHLRTMC 61
           W NDKS  RK   T+C
Sbjct: 302 WKNDKSLKRKFYLTIC 317


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 226  SEDDYPYWQSVDW 188
            S  +YP WQ  +W
Sbjct: 1362 STTNYPEWQPTEW 1374


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 296 TYSIFMVILVAVKIY 340
           TYS+FM+  + V +Y
Sbjct: 251 TYSLFMMANITVAVY 265


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 296 TYSIFMVILVAVKIY 340
           TYS+FM+  + V +Y
Sbjct: 251 TYSLFMMANITVAVY 265


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 296 TYSIFMVILVAVKIY 340
           TYS+FM+  + V +Y
Sbjct: 251 TYSLFMMANITVAVY 265


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +1

Query: 151 RLKKSTGSSRYSTSQRFANRDNRPRMHHIHH 243
           R+K    S R +  Q+  N       +H HH
Sbjct: 295 RMKNKKNSQRQAAQQQNNNNAATNNQNHHHH 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,817
Number of Sequences: 336
Number of extensions: 3420
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)