Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0135
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   5.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 318 RLNGSFKPYVENTPRRNRPSRK 383
           R +G+F P++   P  + P  K
Sbjct: 185 RSDGTFGPFIVRVPEEDNPHAK 206


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +3

Query: 75  FFFKTNHPNTDN 110
           +++  NHPN++N
Sbjct: 359 YYYNKNHPNSEN 370


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 496 YWESDKKELNNNNQQFIDLYLED 564
           +W+ DK      N Q+ID+ L++
Sbjct: 103 FWDVDKWRTLFTNLQYIDINLQN 125


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +3

Query: 75  FFFKTNHPNTDN 110
           +++  NHPN++N
Sbjct: 307 YYYNKNHPNSEN 318


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 181 RYCENKTNFVLT 146
           R+CE+K NF  T
Sbjct: 333 RHCESKVNFCAT 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,171
Number of Sequences: 336
Number of extensions: 3097
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)