Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0072
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    24   0.68 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   8.4  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.8 bits (49), Expect = 0.68
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -1

Query: 159 CFFG--LDVNLEDVDAGFRRRRHNCDHGENRHIRSM 58
           CFF   + + +ED++  FR       +GEN+ I  M
Sbjct: 191 CFFVRVIRLKIEDLNGAFRAGLERVQNGENQWISVM 226


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 370 RLVRGIGTHRILLQRSPQYSRFPFRSSSSV 281
           R V     + ILL+   ++  FPFR ++ +
Sbjct: 189 RAVIDFDNNEILLRNGEKHHSFPFRKTTEI 218


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +2

Query: 77  FSPWSQLCLRRRNP 118
           F PW + C+   NP
Sbjct: 477 FEPWREKCVVEGNP 490


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = -1

Query: 372  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFNC 256
            T+  +++G  V  F +      + +++P++     CF C
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTC 964


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = -1

Query: 372  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFNC 256
            T+  +++G  V  F +      + +++P++     CF C
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTC 964


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = -1

Query: 372  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFNC 256
            T+  +++G  V  F +      + +++P++     CF C
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTC 964


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/39 (20%), Positives = 19/39 (48%)
 Frame = -1

Query: 372  TVLSVVLGRIVYFFNVVLSILDFLSVLPVVSKSGACFNC 256
            T+  +++G  V  F +      + +++P++     CF C
Sbjct: 926  TIFLMLVGAFVAAFQIDNWTSFYYNIIPILFFMLVCFTC 964


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +3

Query: 225 IDQIQRPEVSH 257
           +D++Q+P +SH
Sbjct: 585 VDEVQQPNLSH 595


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,086
Number of Sequences: 336
Number of extensions: 1969
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)