Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0062
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.6  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   9.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 215  YYLVVRLVSLVIIFFDLFQPFNVSY*T 135
            YY+ V  + L+++ + +F   NVS+ T
Sbjct: 1008 YYVTVPSMYLLLVIYSVFNMNNVSWGT 1034


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -3

Query: 215  YYLVVRLVSLVIIFFDLFQPFNVSY*T 135
            YY+ V  + L+++ + +F   NVS+ T
Sbjct: 1008 YYVTVPSMYLLLVIYSVFNMNNVSWGT 1034


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = +3

Query: 105 PQSVKLISTVSLIRNIKRLKQIEKYNH 185
           PQ ++ +   SL+R ++ L +++  +H
Sbjct: 284 PQDIRDLLQYSLVRGVRLLLEVDAPSH 310


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 397 CGIFVLCFRKGMKWKRAILKTH 332
           CG+F +C+ +     +A L++H
Sbjct: 150 CGLFSVCYPRVSAQMKADLRSH 171


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 609 YFSGCVTVERVNEKLTKF 556
           YF GCV    ++E++ KF
Sbjct: 94  YFVGCVESLLLSEEMPKF 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,268
Number of Sequences: 336
Number of extensions: 3359
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)