Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0057
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   0.75 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   3.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   7.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   9.2  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 0.75
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = -1

Query: 244 LLINTKIYLKSLYLKFYTALENDQXXXXXXXXXXFQRC--ALFEIAY 110
           + IN  + L  LY+  Y  L N+Q           + C   +FE+ Y
Sbjct: 221 ITINFVVLLGDLYVTLYIILTNNQAKYCTTLIGLIKNCVIVIFELYY 267


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
          protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 59 LDPFAVSVGVERREGRLVP 3
          L   A+++GVER    L+P
Sbjct: 37 LSTIALALGVERTRSELIP 55


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 308 FVKRDTKFLLHVL 270
           F++++ KFL H+L
Sbjct: 496 FIQKEVKFLGHIL 508


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 326 SSVRAIFVKRDTKFL 282
           SS+RA+F+K   +F+
Sbjct: 115 SSLRAVFIKSVVEFV 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,396
Number of Sequences: 336
Number of extensions: 1287
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)