Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0047
         (337 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   0.65 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   0.86 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   6.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   8.0  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 0.65
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 312 KFSNSMKA-KPGGFSATQTEFSFPYLSNSRSRSSFLIPSTRPPTYTRVPP 166
           KF  S ++ KP G  +T T    P LSN    +     ++   + T +PP
Sbjct: 114 KFETSFESGKPSGVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPP 163


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 0.86
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 282 GGFSATQTEFSFPYLSNSRSRSSFLIPSTRPPTY 181
           GG SA++ + +  +LS+       L PS  PP++
Sbjct: 93  GGISASKRQRTDDWLSSPSGNVPPLTPSPGPPSH 126


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 284  GFAFIEFENL 313
            GFA ++FENL
Sbjct: 1433 GFAVLDFENL 1442


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 251 LNSVWVALNPPGFAFIEFEN 310
           + +VW+  +  G  FIEF N
Sbjct: 88  VGTVWINTSINGTKFIEFIN 107


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 20  IGTRVSIGSVIVSLIFI 70
           IGT+ +I +V  S+IFI
Sbjct: 236 IGTKNTIETVAYSVIFI 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,653
Number of Sequences: 336
Number of extensions: 1497
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)