Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0045
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    31   0.006
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    31   0.006
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   2.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   2.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.1  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 0.006
 Identities = 12/60 (20%), Positives = 30/60 (50%)
 Frame = +3

Query: 27  LTLITGLCGMTFGFVVSCVCDTDRTATYLALGSFLPMVLLCGIIWPVEGMHLILQWISYI 206
           + ++     ++FG+++SCV  +   A  +     +P +L  G    V  + +  +W+S++
Sbjct: 532 IMILVANVAISFGYLISCVSRSVSMALSIGPPLVIPFLLFGGFFLNVSSIPIYFKWLSFL 591


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 0.006
 Identities = 12/60 (20%), Positives = 30/60 (50%)
 Frame = +3

Query: 27  LTLITGLCGMTFGFVVSCVCDTDRTATYLALGSFLPMVLLCGIIWPVEGMHLILQWISYI 206
           + ++     ++FG+++SCV  +   A  +     +P +L  G    V  + +  +W+S++
Sbjct: 532 IMILVANVAISFGYLISCVSRSVSMALSIGPPLVIPFLLFGGFFLNVSSIPIYFKWLSFL 591


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -2

Query: 184 IRCIPSTGHMMPQSNTIGRNEPRAR*VAVLSVSQTQDTTKPKVIPH 47
           + C+   G   P    + R+ P A        S+TQ     K++ H
Sbjct: 47  VNCLLEKGKCTPDGAELKRHLPDALHTECSKCSETQKNGSKKIMRH 92


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 82  TQDTTKPKVIPHNPVISVRNVTSCPP 5
           T+ TTKP   P N  + V      PP
Sbjct: 175 TKFTTKPSTKPTNKPVVVTKPPQAPP 200


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 68  ETKSHSTQSSDQCEECDLVPAT 3
           +  SH    + +C++CD V  T
Sbjct: 192 KVNSHGKIKTFKCKQCDFVAIT 213


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = -1

Query: 113 QVSSCSVGVTNTGHDETKSHSTQSSDQCEEC 21
           +V + S G  +   +  ++H+ +   +C+EC
Sbjct: 138 EVCNRSFGYKHVLQNHERTHTGEKPFECQEC 168


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 301 VDMNPE*TVGTLI 263
           +D NPE T+GT++
Sbjct: 279 LDKNPENTLGTML 291


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,174
Number of Sequences: 336
Number of extensions: 2965
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)