Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0194
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.0  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   2.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.2  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 163 YTTTVVFLLILFG 201
           YTT  +FLL++FG
Sbjct: 244 YTTYTIFLLLIFG 256


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 285 LSHKEVKVQTAALRAVGNIV 344
           L+H+EVK + + L +V NIV
Sbjct: 268 LNHQEVKAECSDLDSVDNIV 287


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 416 SSEREDMQRGGMVSVKH 466
           +S   DM+ GG+VS +H
Sbjct: 7   NSYMPDMRNGGVVSAEH 23


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 416 SSEREDMQRGGMVSVKH 466
           +S   DM+ GG+VS +H
Sbjct: 7   NSYMPDMRNGGVVSAEH 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,197
Number of Sequences: 336
Number of extensions: 4778
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)