Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0187
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   0.75 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    20   7.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   7.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 0.75
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +2

Query: 107 MPVTFKEI--APNHNIPEKWKEIVLNTGGTHSTLQDIKLPQK 226
           MP   KE+   PN+ +PE++K I +          + K+P K
Sbjct: 20  MPKGNKEVFDVPNNFLPERYKPIGVQIANRFGEQANEKIPLK 61


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 104 AMPVTFKEIAPNHNIPE 154
           A+P +F+ IA  +++PE
Sbjct: 679 AVPASFEAIAAGYDVPE 695


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 92  EFLEAMPVTFKEIAPNHN 145
           EFL+A      EI  NHN
Sbjct: 434 EFLDAFLYWVDEILANHN 451


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 100 KKFHGELCNTKAPKSDILVNQLK 32
           K+F   +CN +  +SD L   +K
Sbjct: 373 KRFACPICNKRFMRSDHLAKHVK 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,645
Number of Sequences: 336
Number of extensions: 1585
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)