Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0162
(705 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 33 0.002
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 31 0.012
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 31 0.012
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 26 0.26
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 25 0.45
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 9.8
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 9.8
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.8
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 9.8
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 33.1 bits (72), Expect = 0.002
Identities = 44/178 (24%), Positives = 65/178 (36%), Gaps = 17/178 (9%)
Frame = +2
Query: 47 PPHH--GPEMRALPNHG-PEMRGPPNHGPEMRGPLNHGPEMRGPLTHGPEMR--SPSN-H 208
PPHH GP P G P R PP ++R +GP+ + G E R SPS+ H
Sbjct: 61 PPHHYGGPPSGGQPPQGMPYPRFPPYDRMDIRAAGYYGPQQQ---MDGQEYRPDSPSSMH 117
Query: 209 GPEMRGPPNHGPEM---------RGLPNHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHG 361
P H ++ + +G + GP+ P N+
Sbjct: 118 MANTAAPNGHQTQVVYASCKLQAAAVTQNG--VLGPTGSPPLTTQSMNNHHMGHHMQEQH 175
Query: 362 PEMRSPPNHGPEMRSPPNHGPEM--RGPPNHGPEMRGLPNHGPDMRGPSNHGPEMRGP 529
P+ P + M G M +GPP+ P ++ PN G + P N + P
Sbjct: 176 PQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQPNQG--QQPPGNTAAALPSP 231
Score = 29.1 bits (62), Expect = 0.037
Identities = 44/189 (23%), Positives = 68/189 (35%), Gaps = 7/189 (3%)
Frame = +2
Query: 152 PEMRGPLTHGPEMRSPSNHGPEMRGPPNH--GPEMRGLPNHG-PEMRGPSNHGPEMRGPP 322
P+ G + P PS G PP+H GP G P G P R P ++R
Sbjct: 37 PQGGGAVQPDPGSCDPSV-GLRQGIPPHHYGGPPSGGQPPQGMPYPRFPPYDRMDIRAAG 95
Query: 323 NHGPEMRGPLNHGPEMR--SPPNHGPEMRSPPNHGPEMRGPPNHGPEMRGLPNHGPDMRG 496
+GP+ + G E R SP + + PN + + + +G + G
Sbjct: 96 YYGPQQQ---MDGQEYRPDSPSSMHMANTAAPNGHQTQVVYASCKLQAAAVTQNG--VLG 150
Query: 497 PSNHGPEMRGPPNHGPEMRGPPNHRPEMRGPLNHGPEMRGPLNHGPEM--RGPPNHGPEM 670
P+ P N+ P+ P + M G M +GPP+ P +
Sbjct: 151 PTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPI 210
Query: 671 RGPPNHGSE 697
+ PN G +
Sbjct: 211 QQQPNQGQQ 219
Score = 28.3 bits (60), Expect = 0.064
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +2
Query: 332 PEMR-GPLNHGPEMRSPPNHGPEMRSPPNHGPEMRGPPNHGPEM---RGLPNHGPDMRGP 499
P+MR G + ++G ++ P G P + P + +G+P H GP
Sbjct: 11 PDMRNGGVVSAEHPHQHQHYGAAVQVPQGGGAVQPDPGSCDPSVGLRQGIPPH--HYGGP 68
Query: 500 SNHGPEMRGPPNHGPEMRGPPNHRPEMRGPLNHGPEMR 613
+ G PP P R PP R ++R +GP+ +
Sbjct: 69 PSGGQ----PPQGMPYPRFPPYDRMDIRAAGYYGPQQQ 102
Score = 27.5 bits (58), Expect = 0.11
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 11/151 (7%)
Frame = +2
Query: 17 PPHRGPEARGPPHHGPEMRALPNHGPEMR-GPPNHGPEMRGPLNHGPEMRGPLTHGPE-- 187
PP P R PP+ ++RA +GP+ + + P+ + H P H +
Sbjct: 74 PPQGMPYPRFPPYDRMDIRAAGYYGPQQQMDGQEYRPDSPSSM-HMANTAAPNGHQTQVV 132
Query: 188 -----MRSPSNHGPEMRGPPNHGP-EMRGLPNHGPEMRGPSNHGPEMRGPPNHGPEMRGP 349
+++ + + GP P + + NH H P+ P + M
Sbjct: 133 YASCKLQAAAVTQNGVLGPTGSPPLTTQSMNNHHMGHHMQEQH-PQHHQPHHQQQHMMYG 191
Query: 350 LNHGPEM--RSPPNHGPEMRSPPNHGPEMRG 436
G M + PP+ P ++ PN G + G
Sbjct: 192 GQQGANMHQQGPPHQQPPIQQQPNQGQQPPG 222
Score = 26.2 bits (55), Expect = 0.26
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 41 RGPPHHGPEMRALPNHGPEMRGPPNHGPEMRGPL 142
+GPPH P ++ PN G + P N + PL
Sbjct: 201 QGPPHQQPPIQQQPNQG--QQPPGNTAAALPSPL 232
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 14 GPPHRGPEARGPPHHGPE 67
GPPH+ P + P+ G +
Sbjct: 202 GPPHQQPPIQQQPNQGQQ 219
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 30.7 bits (66), Expect = 0.012
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +2
Query: 62 PEMRALPNHGPEMRGPPNHGPEMRGPLNHGPEMRGPLTHGPEMRSPSNHGPEMRGPPNHG 241
P ALP G G N P M + P + G +THG + SP N P G P
Sbjct: 45 PHPAALPIEGCNETGFINSQPSMAEFMTALPHLSGDMTHGASI-SPQNTPP--AGYPMDV 101
Query: 242 PEMRGLP 262
P G P
Sbjct: 102 PHGMGSP 108
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +2
Query: 242 PEMRGLPNHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHGPEMRSPPNHGP 394
P LP G G N P M P + G + HG + SP N P
Sbjct: 45 PHPAALPIEGCNETGFINSQPSMAEFMTALPHLSGDMTHGASI-SPQNTPP 94
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 30.7 bits (66), Expect = 0.012
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +2
Query: 62 PEMRALPNHGPEMRGPPNHGPEMRGPLNHGPEMRGPLTHGPEMRSPSNHGPEMRGPPNHG 241
P ALP G G N P M + P + G +THG + SP N P G P
Sbjct: 45 PHPAALPIEGCNETGFINSQPSMAEFMTALPHLSGDMTHGASI-SPQNTPP--AGYPMDV 101
Query: 242 PEMRGLP 262
P G P
Sbjct: 102 PHGMGSP 108
Score = 23.8 bits (49), Expect = 1.4
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +2
Query: 242 PEMRGLPNHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHGPEMRSPPNHGP 394
P LP G G N P M P + G + HG + SP N P
Sbjct: 45 PHPAALPIEGCNETGFINSQPSMAEFMTALPHLSGDMTHGASI-SPQNTPP 94
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 26.2 bits (55), Expect = 0.26
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 41 RGPPHHGPEMRALPNHGPEMRGPPNHGPEMRGPL 142
+GPPH P ++ PN G + P N + PL
Sbjct: 203 QGPPHQQPPIQQQPNQG--QQPPGNTAAALPSPL 234
Score = 25.0 bits (52), Expect = 0.60
Identities = 42/177 (23%), Positives = 64/177 (36%), Gaps = 15/177 (8%)
Frame = +2
Query: 44 GPPHHGPEMRALPNHGPEMRGPPNHGPEMRGPLN-HGPEMRGPLTHGPEMR--SPSN-HG 211
G P +G RA P R PP ++R + HGP+ + G E R SPS+ H
Sbjct: 67 GGPRYG---RAAAQGMPYPRFPPYDRMDIRDRRSLHGPQQQ---MDGQEYRPDSPSSMHM 120
Query: 212 PEMRGPPNHGPEM---------RGLPNHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHGP 364
P H ++ + +G + GP+ P N+ P
Sbjct: 121 ANTAAPNGHQTQVVYDSCKLQAAAVTQNG--VLGPTGSPPLTTQSMNNHHMGHHMQEQHP 178
Query: 365 EMRSPPNHGPEMRSPPNHGPEM--RGPPNHGPEMRGLPNHGPDMRGPSNHGPEMRGP 529
+ P + M G M +GPP+ P ++ PN G + P N + P
Sbjct: 179 QHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQPNQG--QQPPGNTAAALPSP 233
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 536 HGPEMRGPPNHRPE-MRGPLNHGPEMRGPLNHGPEMRGPPNHGPEMRGPPNHGSE 697
H + + P +H+P + + +G + +G H +GPP+ P ++ PN G +
Sbjct: 171 HHMQEQHPQHHQPHHQQQHMMYGGQ-QGANMH---QQGPPHQQPPIQQQPNQGQQ 221
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 14 GPPHRGPEARGPPHHGPE 67
GPPH+ P + P+ G +
Sbjct: 204 GPPHQQPPIQQQPNQGQQ 221
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 25.4 bits (53), Expect = 0.45
Identities = 12/41 (29%), Positives = 16/41 (39%)
Frame = +2
Query: 530 PNHGPEMRGPPNHRPEMRGPLNHGPEMRGPLNHGPEMRGPP 652
P H P PP++ P + L H + RGPP
Sbjct: 21 PPHNPAYSPPPSYCDPWYNPYYYQYLQNAALYHKLQFRGPP 61
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = +2
Query: 506 HGPEMRGPPNHGPEMRGPPNHRPEMRGPLNHGPEMRGP 619
H P PP++ P ++ L H + RGP
Sbjct: 23 HNPAYSPPPSYCDPWYNPYYYQYLQNAALYHKLQFRGP 60
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 87 MDPKCAVPLTMDPKCAVPLIMDPK 158
M+P A+P P+ +++DPK
Sbjct: 7 MNPGTALPTYQQPQHISGVVVDPK 30
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 87 MDPKCAVPLTMDPKCAVPLIMDPK 158
M+P A+P P+ +++DPK
Sbjct: 7 MNPGTALPTYQQPQHISGVVVDPK 30
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 18 LHIEAQKRADLHIMAPKCE 74
L + +Q LHI PKCE
Sbjct: 469 LWLLSQTWITLHIWTPKCE 487
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 18 LHIEAQKRADLHIMAPKCE 74
L + +Q LHI PKCE
Sbjct: 469 LWLLSQTWITLHIWTPKCE 487
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 18 LHIEAQKRADLHIMAPKCE 74
L + +Q LHI PKCE
Sbjct: 469 LWLLSQTWITLHIWTPKCE 487
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 18 LHIEAQKRADLHIMAPKCE 74
L + +Q LHI PKCE
Sbjct: 469 LWLLSQTWITLHIWTPKCE 487
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +2
Query: 47 PPHHGPE 67
PPHH PE
Sbjct: 126 PPHHAPE 132
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 87 MDPKCAVPLTMDPKCAVPLIMDPK 158
M+P A+P P+ +++DPK
Sbjct: 7 MNPGTALPTYQQPQHISGVVVDPK 30
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 87 MDPKCAVPLTMDPKCAVPLIMDPK 158
M+P A+P P+ +++DPK
Sbjct: 7 MNPGTALPTYQQPQHISGVVVDPK 30
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,371
Number of Sequences: 336
Number of extensions: 5626
Number of successful extensions: 36
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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