Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120095.Seq
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.8  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +2

Query: 455 KRLQQHAQIL*RIATKTNSTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKN 634
           KR ++ AQ   +   K NST      +     +L+     L N +K +S +  ELI    
Sbjct: 267 KRKEKKAQ---KEKDKPNSTTNGSPDVIKVEPELSDSEKTLCNGSKGISPEQEELIHRLV 323

Query: 635 LLQNEY 652
             QNEY
Sbjct: 324 YFQNEY 329


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 420 SVFMQEKLDRIKNDYNNMHKSFKE 491
           + +  EK+ ++K +YN   K F+E
Sbjct: 179 TAYQNEKITKLKINYNPFAKGFRE 202


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +1

Query: 121 SLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFD-AASLASVLFEKV 261
           +L +    I R +  V    VTS   W  +ND+++    L  +L EK+
Sbjct: 238 ALAYRFGQITRRIAAVASEKVTSEKSWIALNDDYNRLCHLCFLLDEKL 285


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 739 TIN*LIYIYGNICGDSSSVCDTF 671
           TI  L+ ++ N+   S  VCD+F
Sbjct: 216 TIKTLVQMHSNLVTTSEEVCDSF 238


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 739 TIN*LIYIYGNICGDSSSVCDTF 671
           TI  L+ ++ N+   S  VCD+F
Sbjct: 216 TIKTLVQMHSNLVTTSEEVCDSF 238


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 154 NVVDVIKCSVTSVAQWNKINDNFDA 228
           N++ VIK S   +  W  +  +FDA
Sbjct: 486 NLLSVIKSSFLDINTWKMLVKSFDA 510


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,518
Number of Sequences: 336
Number of extensions: 2714
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)