Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021121
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    26   0.36 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    26   0.36 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    26   0.36 
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    26   0.36 
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    26   0.36 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    26   0.36 
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    24   1.4  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   4.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.8  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   7.7  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 51  FYRTKFHITKNILLLKINYR 110
           FY+  + I KNI+ + +NYR
Sbjct: 130 FYQPDYFIDKNIVFVNLNYR 149


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 51  FYRTKFHITKNILLLKINYR 110
           FY+  + I KNI+ + +NYR
Sbjct: 130 FYQPDYFIDKNIVFVNLNYR 149


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 51  FYRTKFHITKNILLLKINYR 110
           FY+  + I KNI+ + +NYR
Sbjct: 130 FYQPDYFIDKNIVFVNLNYR 149


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 51  FYRTKFHITKNILLLKINYR 110
           FY+  + I KNI+ + +NYR
Sbjct: 130 FYQPDYFIDKNIVFVNLNYR 149


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 51  FYRTKFHITKNILLLKINYR 110
           FY+  + I KNI+ + +NYR
Sbjct: 130 FYQPDYFIDKNIVFVNLNYR 149


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 281 NRNCKYNLNHGQKRRESNDNTSTLACGTSSGSGRP 385
           N+  +Y  N G+ + E+N   +  A G S  SG P
Sbjct: 283 NKRIRYKKNIGKAQEEANLYAAKKAAGASPYSGTP 317


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 415 SDARYGRRSRWPPAS*TCAARQRASVVIAFSAFL 314
           S +RYGRRS W         +Q+A   +A +A L
Sbjct: 74  SGSRYGRRSNWFKIHCLLQEQQQAGANMAAAANL 107


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 441 KWRLQIVREIAKKVAQIQNAGLGSSGFAILTTKL 542
           KWR   V  + + +   Q    GSSG+  L + L
Sbjct: 144 KWRYNHVLMVQRMIGSSQLGTGGSSGYQYLRSTL 177


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 441 KWRLQIVREIAKKVAQIQNAGLGSSGFAILTTKL 542
           KWR   V  + + +   Q    GSSG+  L + L
Sbjct: 304 KWRYNHVLMVQRMIGSSQLGTGGSSGYQYLRSTL 337


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 441 KWRLQIVREIAKKVAQIQNAGLGSSGFAILTTKL 542
           KWR   V  + + +   Q    GSSG+  L + L
Sbjct: 304 KWRYNHVLMVQRMIGSSQLGTGGSSGYQYLRSTL 337


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 3   KNTCMYSLVQNCLNIWFYR 59
           +N C Y   Q CLN+   R
Sbjct: 135 RNRCQYCRYQKCLNMGMKR 153


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 500 RSREFRIRDLNDEINKLMRE 559
           RS +F I D  +E+N  +RE
Sbjct: 91  RSIKFNIPDEKNEVNDFLRE 110


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 677 SICIPGCPALLSRPGP 630
           S+ +PG P ++S  GP
Sbjct: 143 SLQVPGAPMMMSSHGP 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,204
Number of Sequences: 336
Number of extensions: 3801
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)