Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0108
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   3.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   3.2  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   3.2  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   3.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.8  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 283 LARSLFNASVTPQERNEQEIPE 348
           +A+ L+N S  P  + E+E+ E
Sbjct: 298 MAQGLYNHSTIPLTKEEEELQE 319


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 266 VFQSVLTSPIVRTPSF 219
           VFQ + +SP  R+P+F
Sbjct: 23  VFQEITSSPAGRSPAF 38


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 266 VFQSVLTSPIVRTPSF 219
           VFQ + +SP  R+P+F
Sbjct: 23  VFQEITSSPAGRSPAF 38


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 266 VFQSVLTSPIVRTPSF 219
           VFQ + +SP  R+P+F
Sbjct: 23  VFQEITSSPAGRSPAF 38


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 373 VVMKYTSRTLVFLVHFF 323
           ++ +Y S  LVFL +FF
Sbjct: 72  ILQRYCSVLLVFLTYFF 88


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 373 VVMKYTSRTLVFLVHFF 323
           ++ +Y S  LVFL +FF
Sbjct: 68  ILQRYCSVLLVFLTYFF 84


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 491 NTI*MSSLTLKHEDDVFSLVTT 556
           +T+ + +L LKH+ ++ SLV T
Sbjct: 260 STLEIDNLYLKHKLEISSLVQT 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,194
Number of Sequences: 336
Number of extensions: 2988
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)