Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0106
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.16 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   1.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   1.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   8.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   8.0  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -2

Query: 225 LMLENSVSITEKSPSLMGIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNTFHWNNTHS 49
           L++ N VSIT++ P+     +    S  F  +  ++   T   +  S++N+FHW+ T S
Sbjct: 194 LLMPNDVSITDE-PAYQYRGIALDTSRNFVTVDVIK--RTLDGMAASKLNSFHWHITDS 249


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 81  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 188
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 81  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 188
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 81  RENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 188
           R+ + +F+  +Q    K   K  TVV+RE+  +S+A
Sbjct: 331 RKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 87  SRVNTFHWNNTHS 49
           +++N FHW+ T S
Sbjct: 267 NKLNVFHWHLTDS 279


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 196 GYRYRILKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQ 309
           GY+  + K  + L  R       NE I   T + RK+Q
Sbjct: 198 GYKRAVYKIGQLLTYRAPRPWIHNETIYSLTPQGRKEQ 235


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 401 SLSYPSDWAQQAVCCH 354
           +L+YPS + Q   C H
Sbjct: 358 NLTYPSYYNQDVSCTH 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,266
Number of Sequences: 336
Number of extensions: 1329
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)