Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0094
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    26   0.29 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   6.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   6.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.2  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 524 TLYQGGYFKAHMKFPPDYPYSPPSIRFLTNVWHPNVY 634
           T+  G +++    FPP YP+ P +   L      N Y
Sbjct: 193 TIALGAFYQPLQPFPPPYPFYPGTSAMLAAYQRYNPY 229


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 374 TLSVMYLFNLHYL 336
           TL V+Y FNL YL
Sbjct: 312 TLVVIYTFNLFYL 324


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 374 TLSVMYLFNLHYL 336
           TL V+Y FNL YL
Sbjct: 268 TLVVIYTFNLFYL 280


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +1

Query: 523 YTLSRWILQGTHEIPP*LPVF 585
           Y    W+  G  E+PP  P++
Sbjct: 90  YVNGEWVPGGKAEVPPSNPIY 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,092
Number of Sequences: 336
Number of extensions: 4732
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)