Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0068
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   3.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   3.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   8.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   8.8  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 220 VKPILSTKVSQWSFSTLLK*YRRVFTQ 300
           V P+L++ ++ WS  T  K Y  +F +
Sbjct: 420 VGPLLTSALASWSPLTNPKQYMEIFAR 446


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 332 CRVLSEILGPIWVKTLRYHFNNV 264
           C +LS ILG  W+  +R +   +
Sbjct: 48  CFLLSTILGTCWIIYVRIYCKEI 70


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 143 FN*YKFNFGFRSESCIEQIH 202
           F   K +  FR+ SC+E  H
Sbjct: 242 FESLKKSLNFRTPSCLETFH 261


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = -2

Query: 323 LSEILGPIWVKTLRYHFNNVENDH*D 246
           L+ +LG  W     YH   +   H D
Sbjct: 190 LTIVLGETWTSLSVYHLVEISEIHFD 215


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = -2

Query: 323 LSEILGPIWVKTLRYHFNNVENDH*D 246
           L+ +LG  W     YH   +   H D
Sbjct: 186 LTIVLGETWTSLSVYHLVEISEIHFD 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,251
Number of Sequences: 336
Number of extensions: 2069
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)