Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0066
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.27 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.8  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   5.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
 Frame = -3

Query: 283 LHFLYT*CFYVFVFK*FSFRTENAEDFREMSVLYL-SIQTIYRTI*RHCCTFTFIALFTI 107
           +H L   C Y F +    F    A     M +L+L  I   Y  +    C + F   F I
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCC--AFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFII 307

Query: 106 KI*LAFHYFCIFNIQIQKSTVY 41
                 H++C F++   KST Y
Sbjct: 308 ---FPTHFYCAFSLYPLKSTFY 326



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 434 CFYYSTFQSQLILDSQICCSFLILSFHKL 348
           C YY  +   L      CC+F+I + H L
Sbjct: 257 CIYYFYYMHLLF-----CCAFIIFTMHLL 280



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 139 CTFTFIALFTIKI*LAFHYFCIFNI 65
           C F    +  + +   +H+FC F I
Sbjct: 151 CAFIIFTVHLLFLLCIYHFFCAFII 175



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -2

Query: 494 YYKCEFQSRSFHQGSYNWSFCFYYSTFQSQLILDSQI--CCSFLILSFHKLTHGLLDF 327
           Y+ C F   + H     +  C Y+  F + +I    +  CC+F+  + H L    LD+
Sbjct: 148 YFYCAFIIFTVH---LLFLLCIYHF-FCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDY 201


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 348 NTWFTRFCLKRVTC 307
           NTW + FC+K   C
Sbjct: 308 NTWISLFCVKVTNC 321


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/44 (18%), Positives = 21/44 (47%)
 Frame = -1

Query: 363  IVSQANTWFTRFCLKRVTCWSLVATKCFISCIPNAFMSSFLSNL 232
            +++   ++F   CL     W +V    ++  IP+ ++   L ++
Sbjct: 1008 LIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLLLILYSI 1051


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/44 (18%), Positives = 21/44 (47%)
 Frame = -1

Query: 363  IVSQANTWFTRFCLKRVTCWSLVATKCFISCIPNAFMSSFLSNL 232
            +++   ++F   CL     W +V    ++  IP+ ++   L ++
Sbjct: 1008 LIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLLLILYSI 1051


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/44 (18%), Positives = 21/44 (47%)
 Frame = -1

Query: 363  IVSQANTWFTRFCLKRVTCWSLVATKCFISCIPNAFMSSFLSNL 232
            +++   ++F   CL     W +V    ++  IP+ ++   L ++
Sbjct: 1008 LIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLLLILYSI 1051


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/44 (18%), Positives = 21/44 (47%)
 Frame = -1

Query: 363  IVSQANTWFTRFCLKRVTCWSLVATKCFISCIPNAFMSSFLSNL 232
            +++   ++F   CL     W +V    ++  IP+ ++   L ++
Sbjct: 1008 LIAMTGSFFIAACLHPQEFWCIVPGIIYLLSIPSMYLLLILYSI 1051


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 362 IISEMSNRFENLKLTETEMLNNRNKKTNYNFLDENFGTEIHIYNSLRL 505
           +I+  S   E++     E+L + +KK +YN L      E  I  +LRL
Sbjct: 11  LIARHSEVQESIVAEMREVLGDLSKKPSYNDLQNLKYLERCIKETLRL 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,950
Number of Sequences: 336
Number of extensions: 2282
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)