Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D05
         (285 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   0.48 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   1.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   2.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   2.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   3.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   7.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   7.8  

>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 23.4 bits (48), Expect = 0.48
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 116 IFLVAKAFAVMSWLSLW-KRFTLPAAVTL 33
           I++ +    ++SW+S W  R   PA V L
Sbjct: 74  IYIPSGLIVIISWVSFWLNRNATPARVAL 102


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 43  AAGKVNLFHNDNHDITAKAFATRNMPDI 126
           AA K+N FH    D  +  F   ++PD+
Sbjct: 235 AASKLNSFHWHITDSHSFPFTAESLPDL 262


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 95  FAVMSWLSLWKRFTL 51
           F ++  L +W+RFT+
Sbjct: 171 FMMLLMLEIWRRFTI 185


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 95  FAVMSWLSLWKRFTL 51
           F ++  L +W+RFT+
Sbjct: 167 FMMLLMLEIWRRFTI 181


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 43  AAGKVNLFHNDNHDITAKAFATRNMPDIA 129
           AA K+N+FH    D  +    ++ +P +A
Sbjct: 265 AANKLNVFHWHLTDSQSFPLVSQRVPQLA 293


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 171  IVYSATDSVEVGYISDIWHISGGESLRCDVVVIVVE 64
            IV SA   +EV   S   H+S      C ++  V+E
Sbjct: 1492 IVPSAEKFIEVSSNSITLHLSAWSDGGCPMLYFVIE 1527


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +3

Query: 132  CTQLQHCRW 158
            CT+  HC W
Sbjct: 1291 CTRYLHCLW 1299


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 152  TVLKLGTLAISGIFLVAKAFAVMSWLSLW 66
            T+L  GT+ +  +     AF + +W S +
Sbjct: 920  TILGPGTIFLMLVGAFVAAFQIDNWTSFY 948


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 152  TVLKLGTLAISGIFLVAKAFAVMSWLSLW 66
            T+L  GT+ +  +     AF + +W S +
Sbjct: 920  TILGPGTIFLMLVGAFVAAFQIDNWTSFY 948


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 152  TVLKLGTLAISGIFLVAKAFAVMSWLSLW 66
            T+L  GT+ +  +     AF + +W S +
Sbjct: 920  TILGPGTIFLMLVGAFVAAFQIDNWTSFY 948


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -2

Query: 152  TVLKLGTLAISGIFLVAKAFAVMSWLSLW 66
            T+L  GT+ +  +     AF + +W S +
Sbjct: 920  TILGPGTIFLMLVGAFVAAFQIDNWTSFY 948


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,867
Number of Sequences: 336
Number of extensions: 1490
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)