Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D16
         (857 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   2.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   7.1  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   7.1  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   9.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.4  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 4   WICIGRFHPLRWTALAW 54
           W+    F P+RW A  W
Sbjct: 256 WLAHWAFAPIRWVAKLW 272


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -1

Query: 665 PGL-LY*CHITLAVVIGLK-TIRVGT 594
           PG  L+ CH    +VIG+   ++VGT
Sbjct: 664 PGFWLFHCHFLFHIVIGMNLVLQVGT 689


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 118 WTSVKVNC*DNILLIKSGIRSDIVL 192
           W  V  N  DN+  ++ G  SD+ +
Sbjct: 492 WPQVPKNATDNLTYLRIGAPSDVTV 516


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 636 SSSSHWLKNDSCRNYPLVMTDPL 568
           SS+S+  K  SCR +   + DPL
Sbjct: 57  SSNSYTPKIKSCRPFKAYIKDPL 79


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 299 KIKHYADQNTSSCTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVLAH 448
           ++KH  +Q     TP+        S +  SV S    +  +IV   +L+H
Sbjct: 140 RMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIV-DRLLSH 188


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 414 TKKSSHLTFWLMLPSLTVDVITWRSLTEIQHVTSYCKK 527
           T+     TFW    +  V  I W +    + V+  C K
Sbjct: 321 TQLDYFFTFWAFSNACEVMAIVWITSETCEEVSKKCYK 358


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 386 RRYYTTYVCCIHVLV 342
           R+YY   VCC+++ +
Sbjct: 53  RKYYWLNVCCLNLSI 67


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 299 KIKHYADQNTSSCTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVLAH 448
           ++KH  +Q     TP+        S +  SV S    +  +IV   +L+H
Sbjct: 131 RMKHKKEQMNKVSTPRSSPAETASSLSPQSVASTASSADHQIV-DRLLSH 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,313
Number of Sequences: 336
Number of extensions: 3861
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)