Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_C05
         (878 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   7.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   7.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   9.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 16  IKTNESGRWRCTANPNNNC*DEESVMSVI*LP 111
           I TN+ G +RC A+      D  + ++V  LP
Sbjct: 481 IHTNDGGLYRCVASSKVGSADHSARINVYGLP 512


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 123 ITSLR*LDYGHYAFFVLAIIVWVCGATPPPRFV 25
           +T L  L +  Y  + LAI+ W C +T  PRF+
Sbjct: 238 LTILTYLIWTIYEMYHLAIL-WSCTSTNCPRFL 269


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 681 GLXPIFRPIIWHSWTLILR 737
           G+ P +  ++WH+W  ++R
Sbjct: 466 GIQP-YDSLLWHTWMPVMR 483


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 517 GTCGIRLHRSSSGQRYALGP 576
           G CGIR  +     RYA GP
Sbjct: 414 GECGIRRVQQLGILRYAKGP 433


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 517 GTCGIRLHRSSSGQRYALGP 576
           G CGIR  +     RYA GP
Sbjct: 414 GECGIRRVQQLGILRYAKGP 433


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 7  KNLIKTNESGRWRCTAN 57
          KN+   N + RW C +N
Sbjct: 16 KNISALNGAWRWECKSN 32


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 776 LPSLLXRIPXRNAAQYKRPA 717
           LPSL    P  N A YK  A
Sbjct: 57  LPSLFPFSPCNNTANYKSEA 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,426
Number of Sequences: 336
Number of extensions: 3551
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)