Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A22
(865 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 65 8e-13
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 63 2e-12
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 62 4e-12
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 60 2e-11
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 60 2e-11
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 45 9e-07
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 26 0.33
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 22 5.4
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.1
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 7.1
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 9.4
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 64.9 bits (151), Expect = 8e-13
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 384
++ E + A L + W D L WN E+G L ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVID 564
G + V +NGS ++ + M + +P D Q C KFGS ++ +Q+D V++
Sbjct: 102 GTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVLN 161
Query: 565 K----XIYSMFXSGXWDVTG 612
+ +G W + G
Sbjct: 162 SESGGDLSDFITNGEWYLIG 181
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 63.3 bits (147), Expect = 2e-12
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 384
++ E + A L + W D L WN E+G L ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVID 564
G + V +NGS ++ + + + +P D Q C KFGS ++ +Q+D V++
Sbjct: 102 GTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQLDLVLN 161
Query: 565 K----XIYSMFXSGXWDVTG 612
+ +G W + G
Sbjct: 162 SESGGDLSDFITNGEWYLIG 181
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 62.5 bits (145), Expect = 4e-12
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Frame = +1
Query: 211 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 384
++ E + A L + W D L WN E+G L ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 385 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVID 564
G + V + GS ++ + M + +P D Q C KFGS ++ +Q+D V++
Sbjct: 102 GTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVLN 161
Query: 565 K----XIYSMFXSGXWDVTG 612
+ +G W + G
Sbjct: 162 SESGGDLSDFITNGEWYLIG 181
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 60.5 bits (140), Expect = 2e-11
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 426
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 427 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVIDK----XIYSMFXSG 594
++ + M + +P D Q C KFGS ++ +Q+D V++ + +G
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVLNSESGGDLSDFITNG 175
Query: 595 XWDVTG 612
W + G
Sbjct: 176 EWYLIG 181
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 60.5 bits (140), Expect = 2e-11
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 426
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 427 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDQMDFVIDK----XIYSMFXSG 594
++ + M + +P D Q C KFGS ++ +Q+D V++ + +G
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVLNSESGGDLSDFITNG 175
Query: 595 XWDVTG 612
W + G
Sbjct: 176 EWYLIG 181
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 44.8 bits (101), Expect = 9e-07
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRDPPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDK 276
++S ++DS +YD+ P+ + V +T++ L +++ E + + + W D
Sbjct: 40 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 99
Query: 277 RLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSV 429
RL++ G T V SE +W PD +N ATT+ ++ RV ++GS+
Sbjct: 100 RLAYGKRP-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHHSGSI 155
Query: 430 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
+ RL I+ M L P D Q C + S
Sbjct: 156 TRSIRLTITASCPMNLQYLPMDRQLCHIEIES 187
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.33
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 394 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 495
A+ + N + SW + ++ + + M LDNW ND
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/27 (25%), Positives = 11/27 (40%)
Frame = -3
Query: 677 NNCHXEXXTSPPVXXXHRXWTXPVTSH 597
N C + +PP+ H W + H
Sbjct: 82 NYCDNKQQANPPISTEHCDWLYGIFGH 108
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.1
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 441 LYPG-DGAVIRYTGAESVVPGGGC 373
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 141 NVRSGPPPRLQNRSQPDPA 197
++ S PPP Q +QP P+
Sbjct: 325 SLTSSPPPPYQISAQPTPS 343
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 293 QGSGAAALGWCPRN 334
+ S A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,806
Number of Sequences: 336
Number of extensions: 3815
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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