Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00035
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 138 7e-34
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 116 3e-27
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 109 5e-25
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 102 6e-23
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 96 5e-21
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 85 1e-17
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 73 3e-14
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 54 3e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 35 0.010
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 28 1.2
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 2.7
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.7
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.6
SPBC646.13 |sds23|psp1, moc1|inducer of sexual development Sds23... 26 4.8
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.8
SPBC887.10 |mcs4||two-component response regulator |Schizosaccha... 26 4.8
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 6.3
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 8.4
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 138 bits (334), Expect = 7e-34
Identities = 68/108 (62%), Positives = 76/108 (70%)
Frame = +3
Query: 186 GLHFPSCHPQFHAARRGLHQP*RTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 365
G F PQF + TGGKSIYG KF DENF LKH PG+LSMANAG +TNG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
Query: 366 SQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIV 509
SQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG T RIV
Sbjct: 108 SQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIV 155
Score = 107 bits (258), Expect = 1e-24
Identities = 48/68 (70%), Positives = 52/68 (76%)
Frame = +1
Query: 58 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 237
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 238 FTNHNGLG 261
FT NG G
Sbjct: 65 FTRGNGTG 72
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 116 bits (279), Expect = 3e-27
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGGKSIYG++F DENF L H PG+LSMANAG D+NGSQFFITTVKT WLDG HVVFG V
Sbjct: 96 TGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEV 155
Query: 435 VEGMEVVKQI 464
+ G ++VK+I
Sbjct: 156 LSGYDIVKKI 165
Score = 101 bits (241), Expect = 1e-22
Identities = 47/79 (59%), Positives = 54/79 (68%)
Frame = +1
Query: 25 ANTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 204
AN G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHR
Sbjct: 19 ANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHR 78
Query: 205 VIPNFMLQGGDFTNHNGLG 261
VIPNFM+QGGD T +G G
Sbjct: 79 VIPNFMIQGGDITKGDGTG 97
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 109 bits (261), Expect = 5e-25
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = +3
Query: 255 TGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
TGG+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG V
Sbjct: 76 TGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKV 135
Query: 435 VEGMEVVKQIETFGSQS 485
++G V+ IE +++
Sbjct: 136 IQGKSTVRTIENLETKN 152
Score = 72.5 bits (170), Expect = 6e-14
Identities = 37/72 (51%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = +1
Query: 58 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNFML 225
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI NFML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 226 QGGDFTNHNGLG 261
QGGDFT NG G
Sbjct: 66 QGGDFTRGNGTG 77
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 102 bits (244), Expect = 6e-23
Identities = 46/73 (63%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Frame = +3
Query: 255 TGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 431
TG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVFG
Sbjct: 80 TGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGE 139
Query: 432 VVEGMEVVKQIET 470
V+EG ++VK+IE+
Sbjct: 140 VIEGYDIVKEIES 152
Score = 83.8 bits (198), Expect = 2e-17
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Frame = +1
Query: 49 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 210
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 211 PNFMLQGGDFTNHNGLGES 267
FM+QGGDF + +G G +
Sbjct: 65 QGFMIQGGDFVSGDGTGSA 83
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 95.9 bits (228), Expect = 5e-21
Identities = 43/70 (61%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +3
Query: 258 GGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
GG SIYG+KF+DE + L HTG G+LSMANAG +TN SQFFIT T WLDG+H +FG V
Sbjct: 63 GGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRV 122
Query: 435 VEGMEVVKQI 464
V G+ V K++
Sbjct: 123 VSGLSVCKRM 132
Score = 61.7 bits (143), Expect = 1e-10
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = +1
Query: 88 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+F++QGGD T G S
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGTS 66
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 84.6 bits (200), Expect = 1e-17
Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Frame = +3
Query: 255 TGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 431
TGG+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT T WLDG+H +F
Sbjct: 515 TGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFAR 574
Query: 432 VVEGMEVVKQIE 467
G++VV +IE
Sbjct: 575 AYAGLDVVHRIE 586
Score = 46.8 bits (106), Expect = 3e-06
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
G I I+L + PK +NF E G+ Y +IFHR+I NFM+QGGD GES
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLGDGTGGES 519
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 73.3 bits (172), Expect = 3e-14
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 GGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
GG+SI+G F+DE LKH G++SMAN G +TNGSQFFI LD +H +FG V
Sbjct: 337 GGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRV 396
Query: 435 VEGMEVVKQIETFGSQSGKTSK 500
V G+ V+ +E + S K
Sbjct: 397 VGGLNVLDALEKVPTNSNDHPK 418
Score = 44.0 bits (99), Expect = 2e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGDPSGTGRGGQS 340
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 53.6 bits (123), Expect = 3e-08
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +1
Query: 91 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGLGES 267
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T GES
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGGES 77
Score = 43.2 bits (97), Expect = 4e-05
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 258 GGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNV 434
GG+SIYG F E L+ G++ MA + N SQFFIT T +G+ +FG V
Sbjct: 74 GGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRV 133
Query: 435 V 437
V
Sbjct: 134 V 134
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 35.1 bits (77), Expect = 0.010
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +1
Query: 79 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGL 258
+ +G +VI+L PKTCENF LC K Y F+ + N+ Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 259 G 261
G
Sbjct: 63 G 63
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = -2
Query: 541 FKLGNLTTVFDTILLEVFPDWLPKVSI--CLTTSMPSTTFPKTTCLPSSQE-VLT-VVMK 374
FK + +T+ DTI++ FPD + + + + P T F K++ LP Q+ VLT ++K
Sbjct: 52 FKSPDESTLTDTIVVRHFPDLVMEFFLPEAYPFNSPPTFFLKSSWLPLKQKRVLTSSLIK 111
Query: 373 NWEPL 359
W +
Sbjct: 112 LWNEI 116
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 67 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 162
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 490 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 404
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 362 WFPVLHHHC 388
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC646.13 |sds23|psp1, moc1|inducer of sexual development
Sds23/Moc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -1
Query: 371 LGTISISTGISHGEDARSS--VLKGEILVFKLIAVDGLSPSPLWLVKSPPC 225
L I GI G+D+ + + + F L + LWLV+SP C
Sbjct: 280 LSVIKSEQGIRAGKDSAPAFNIYESSTFAFTLAKLVATQCHRLWLVQSPSC 330
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 457 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 308
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPBC887.10 |mcs4||two-component response regulator
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 522
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 205 VIPNFMLQGGDFTNHNGLGESPSTAISLKTRISPLSTLDLASSP 336
V+ + G DF N L SP T+++L+ R S LS+ S+P
Sbjct: 76 VMETYYPHGQDF-NDALLVASPDTSVALRYRSSQLSSSTFESTP 118
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.3
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = -2
Query: 475 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 296
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 295 SSSNL 281
SSS++
Sbjct: 222 SSSSI 226
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -3
Query: 243 GEVPSLQHEIGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 64
GEV ++QH +T+++ T S+ TE+ RL + + ++ N +
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936
Query: 63 EEYS 52
E++S
Sbjct: 937 EDHS 940
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 8.4
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = -1
Query: 446 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 285
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 284 LIAVDGLSPS 255
LSPS
Sbjct: 287 KFLHHSLSPS 296
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,195,498
Number of Sequences: 5004
Number of extensions: 69628
Number of successful extensions: 237
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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