Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesV0271.Seq
(792 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 68 1e-12
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 42 1e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 36 0.009
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 33 0.047
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 33 0.047
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 32 0.082
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 32 0.082
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 32 0.11
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 0.58
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 29 0.76
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 29 1.0
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 27 2.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 27 3.1
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 27 3.1
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 27 4.1
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 26 5.4
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 26 7.1
SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130 |S... 26 7.1
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 7.1
SPBC1709.06 |dus2||tRNA dihydrouridine synthase Dus2 |Schizosacc... 26 7.1
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 26 7.1
SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit ... 25 9.4
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 25 9.4
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 68.1 bits (159), Expect = 1e-12
Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 SLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 253
SL FVY LD+ARTRLA D K G+R+F+GL + K ++SDGL GLYRGFG SV G
Sbjct: 146 SLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVG 204
Score = 66.5 bits (155), Expect = 4e-12
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 IIYRASYFGFYDTARGM-LPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSG 432
++YR YFG YDT + + L P + S+ + VTT +G+ SYP DT+RRRMMM SG
Sbjct: 206 VVYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSG 265
Query: 433 RAKSDILYKNTIHCWATIAKTEG 501
A + Y ++ C I EG
Sbjct: 266 EA---VKYSSSFECGRQILAKEG 285
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 498 GNLGFFKGAFSNVLRGTGGAFVLVLYDEIK 587
G FFKGA +N+LRG GA VL +YD+++
Sbjct: 285 GARSFFKGAGANILRGVAGAGVLSIYDQVQ 314
Score = 25.8 bits (54), Expect = 7.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 164 FSGLGNCISKIFKSDGLIGLYRG 232
+ G+G C + +G+I L+RG
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRG 93
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 95 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
+YPLD +TR+ VGK D ++G +C+ KI K++G LYRG
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRG 67
Score = 34.3 bits (75), Expect = 0.020
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 322 NTPIVISWAIAQTVTTVAGIIS-YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTE 498
N P +++A A V ++ +++ YP D V+ RM + G KSD Y T C I K E
Sbjct: 5 NIPFPVTFA-AGAVAGISEVLTLYPLDVVKTRMQLSVG--KSD--YNGTFDCLKKIVKNE 59
Query: 499 G 501
G
Sbjct: 60 G 60
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 35.5 bits (78), Expect = 0.009
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +1
Query: 268 ASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSD 447
A YF + + + + P+ + A A +T ++ PFD +++RM + S +
Sbjct: 93 AIYFSVLEFFKSKINASPDRPLASALAGACAIT-ISDAFMTPFDVIKQRMQLPSRK---- 147
Query: 448 ILYKNTIHCWATIAKTEG 501
YK+ +HC T+ + EG
Sbjct: 148 --YKSALHCATTVFRNEG 163
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.1 bits (72), Expect = 0.047
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 101 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 253
P+ +TRL D G + S + +CI K + +G GLY+G S+ G
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLG 231
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 33.1 bits (72), Expect = 0.047
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +1
Query: 271 SYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDI 450
+Y + + LP + V ++ + + + P DTV+ RM QS A +
Sbjct: 183 AYNSIKQSLQSRLPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVKSRM--QSLSASKE- 239
Query: 451 LYKNTIHCWATIAKTEG 501
YKN+IHC I +G
Sbjct: 240 -YKNSIHCAYKILTQDG 255
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 32.3 bits (70), Expect = 0.082
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +2
Query: 170 GLGNCISKIFKSDGLIGLYRGFG 238
G+ + + ++KS+GL+GL+RGFG
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFG 305
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 32.3 bits (70), Expect = 0.082
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 89 CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 232
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG 265
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 31.9 bits (69), Expect = 0.11
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 FVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQG 253
F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG V + G
Sbjct: 245 FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILG 297
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 29.5 bits (63), Expect = 0.58
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 161 HAGHRPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQRRR 3
H P R R RD RS +RS R HR DY RS ++ + RR
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.76
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 158 REFSGLGNCISKIFKSDGLIGLYRGFGVS 244
+E++ L + + KI+ +GLIG +RG G +
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTN 82
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 98 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 235
+P D R R + G G + + + I I+K++G+ G +RG+
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGY 289
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 28.7 bits (61), Expect = 1.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 179 NCISKIFKSDGLIGLYRGFG 238
+CI K +S+G LY+GFG
Sbjct: 271 DCILKTIRSEGFFALYKGFG 290
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 394 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEG 501
FDTV RM Q K+ LYKN I C ++EG
Sbjct: 250 FDTVMTRMYNQ----KNKELYKNPIDCILKTIRSEG 281
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 164 FSGLGNCISKIFKSDGLIGLYRGFGVS 244
++ + + I I+K +G+ G +RGFGV+
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVT 167
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 571 KTSTKAPPVPLRTLEKAPLKKP 506
K S+KAPPVPL + + P+ P
Sbjct: 1016 KLSSKAPPVPLPSADAPPIPVP 1037
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 566 EHEGTTSTSEDVGEGSLEEAEVPSVL 489
+HE +ST+ V +GSLE E P+ L
Sbjct: 260 KHEALSSTANIVKDGSLERTEPPNSL 285
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 179 NCISKIFKSDGLIGLYRGFGVSV 247
N IS + +S+GL G YRG+ + V
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGV 143
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 98 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 235
YP D ++++ D + + C I+ GL G YRGF
Sbjct: 231 YPFDIVKSKIQTDGFLS--KATYKNSWQCAKGIYTKAGLRGFYRGF 274
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 615 VTIISNVIPCRSQFPSDHVIIRH 683
V+II++ + +QFP HV+++H
Sbjct: 337 VSIIADYVGTSNQFPIGHVVMKH 359
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 170 GLGNCISKIFKSDGLIGLYRGFGVSV 247
G G ++I+K G GL+ G GV +
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRI 283
>SPAPJ698.03c |prp12|sap130|U2 snRNP-associated protein Sap130
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1206
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 637 ITLEIMVTILTLDLQTFLISSYKTSTKAPPVPLRTLEKA 521
IT++ T+L + +TFL SY+ + + P+ ++ A
Sbjct: 722 ITMKNQNTVLAVSSRTFLAYSYQQNLQLSPIAYSAIDHA 760
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 301 GMLPDPKNTPIVISWAIAQTVTTV 372
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPBC1709.06 |dus2||tRNA dihydrouridine synthase Dus2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 479
Score = 25.8 bits (54), Expect = 7.1
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +3
Query: 582 IKKVCKSNVRIVTIISNVIPCRSQFPSD 665
++++C + VR +T+ P R+ P+D
Sbjct: 173 VERICDTGVRAITVHCRTTPMRNTEPAD 200
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 164 FSGLGNCISKIFKSDGLIGLYRG 232
F + +C K++GL GLYRG
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRG 72
>SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit
Rrn6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 868
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +3
Query: 594 CKSNVRIVTIISNVIPCRSQF 656
C S+VRI+ +++ +P +S+F
Sbjct: 383 CSSDVRILQVVNESMPIKSEF 403
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 9.4
Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 414 HDDAVWSCQERYPV----QEHHPLLGYHCQDRGNLGFFKGAFSNVLR 542
H + + S + Y + ++ + + C +GNL + GAF N ++
Sbjct: 278 HSETIQSLESHYKLNQVGEKEYSTISDLCFSKGNLFLYTGAFDNAVK 324
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,796,213
Number of Sequences: 5004
Number of extensions: 52508
Number of successful extensions: 209
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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