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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30208.Seq
         (757 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef...   169   4e-43
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef...   169   5e-43
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef...   169   5e-43
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa...    97   2e-21
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote...    93   3e-20
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E...    73   4e-14
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su...    37   0.003
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac...    36   0.008
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon...    36   0.008
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz...    34   0.019
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch...    33   0.033
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce...    32   0.10 
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po...    31   0.23 
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma...    31   0.23 
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce...    30   0.41 
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    29   0.54 
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb...    27   2.2  
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy...    26   6.7  
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||...    25   8.8  

>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
           Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 460

 Score =  169 bits (411), Expect = 4e-43
 Identities = 86/137 (62%), Positives = 99/137 (72%)
 Frame = +2

Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
           IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+  GTGEFEAGISK+GQ
Sbjct: 73  IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQ 132

Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLGLQPSCCRFRA 616
           TREHALLA+TLGVKQLIV VNKMD            +  ++  +  +++G  P    F  
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF-V 189

Query: 617 HFLDGTGDNMLEPSTKM 667
                 GDNM+EP+T M
Sbjct: 190 PVSGFQGDNMIEPTTNM 206



 Score =  141 bits (341), Expect = 1e-34
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +1

Query: 43  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60

Query: 223 DKLKAERE 246
           DKLKAERE
Sbjct: 61  DKLKAERE 68


>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
           Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 460

 Score =  169 bits (410), Expect = 5e-43
 Identities = 85/137 (62%), Positives = 99/137 (72%)
 Frame = +2

Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
           IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+  GTGEFEAGISK+GQ
Sbjct: 73  IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132

Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLGLQPSCCRFRA 616
           TREHALLA+TLGVKQLIV VNKMD            +  ++  +  +++G  P    F  
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF-V 189

Query: 617 HFLDGTGDNMLEPSTKM 667
                 GDNM+EP+T M
Sbjct: 190 PVSGFQGDNMIEPTTNM 206



 Score =  141 bits (341), Expect = 1e-34
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +1

Query: 43  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60

Query: 223 DKLKAERE 246
           DKLKAERE
Sbjct: 61  DKLKAERE 68


>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
           Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score =  169 bits (410), Expect = 5e-43
 Identities = 85/137 (62%), Positives = 99/137 (72%)
 Frame = +2

Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
           IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+  GTGEFEAGISK+GQ
Sbjct: 73  IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132

Query: 437 TREHALLAFTLGVKQLIVGVNKMDPLNHHTVSPDLRKSRRKYPHTSRRLGLQPSCCRFRA 616
           TREHALLA+TLGVKQLIV VNKMD            +  ++  +  +++G  P    F  
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDTTGWSQAR--FEEIVKETSNFIKKVGFNPKTVPF-V 189

Query: 617 HFLDGTGDNMLEPSTKM 667
                 GDNM+EP+T M
Sbjct: 190 PVSGFQGDNMIEPTTNM 206



 Score =  141 bits (341), Expect = 1e-34
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = +1

Query: 43  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
           MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1   MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60

Query: 223 DKLKAERE 246
           DKLKAERE
Sbjct: 61  DKLKAERE 68


>SPCC584.04 |sup35|erf3|translation release factor eRF3
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 97.1 bits (231), Expect = 2e-21
 Identities = 42/84 (50%), Positives = 59/84 (70%)
 Frame = +2

Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
           +++    FET     +++DAPGH+ ++ NMI G SQAD  VL+++A  GEFEAG  + GQ
Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQ 363

Query: 437 TREHALLAFTLGVKQLIVGVNKMD 508
           TREHA+LA T G+  L+V +NKMD
Sbjct: 364 TREHAVLARTQGINHLVVVINKMD 387



 Score = 80.6 bits (190), Expect = 2e-16
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = +1

Query: 55  KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
           K H+NIV IGHVD+GKST  G++++  G +DKRT+EK E+EA+E GK S+  +W LD   
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295

Query: 235 AERE 246
            ERE
Sbjct: 296 EERE 299


>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 592

 Score = 93.5 bits (222), Expect = 3e-20
 Identities = 44/84 (52%), Positives = 55/84 (65%)
 Frame = +2

Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
           +D+A   FE+ K    I DAPGHRDFI  MI G S AD AVL+V +    FE G  +NGQ
Sbjct: 243 MDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQ 302

Query: 437 TREHALLAFTLGVKQLIVGVNKMD 508
           TREHA L   LG+ +++V VNK+D
Sbjct: 303 TREHAYLLRALGISEIVVSVNKLD 326



 Score = 72.5 bits (170), Expect = 6e-14
 Identities = 31/63 (49%), Positives = 44/63 (69%)
 Frame = +1

Query: 55  KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
           K  +++VV GHVDSGKST  G ++++ G I+ R+++K   EA   GKGSF YAW+LD  +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234

Query: 235 AER 243
            ER
Sbjct: 235 EER 237



 Score = 27.9 bits (59), Expect = 1.7
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +1

Query: 523 YSEPRFEEIKKEVSSY-IKKIGLTTQLLSLSCPFSGWHGRQHVGAFNQN--AWFKG 681
           +SE RF+EIK  VS + IK +G  T  +    P S   G   +   + +   W+KG
Sbjct: 330 WSEDRFQEIKNIVSDFLIKMVGFKTSNVHF-VPISAISGTNLIQKDSSDLYKWYKG 384


>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
           EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 439

 Score = 72.9 bits (171), Expect = 4e-14
 Identities = 35/78 (44%), Positives = 52/78 (66%)
 Frame = +2

Query: 275 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 454
           ++ET+  +   +D PGH D+IKNMITG +  D A+++V+A  G+         QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162

Query: 455 LAFTLGVKQLIVGVNKMD 508
           LA  +GVKQ++V +NK+D
Sbjct: 163 LARQVGVKQIVVYINKVD 180



 Score = 35.1 bits (77), Expect = 0.011
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +1

Query: 49  KEKTHINIVVIGHVDSGKSTTTGHLIYKC 135
           ++K H+NI  IGHVD GK+T T   I KC
Sbjct: 49  RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76


>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 446

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +2

Query: 296 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 475
           +V+ +D PGH   +  M+ G +  D A+L++A              QT EH      + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162

Query: 476 KQLIVGVNKMD 508
           K +I+  NK+D
Sbjct: 163 KHIIILQNKVD 173


>SPCP31B10.07 |eft202||translation elongation factor 2
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 842

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +1

Query: 43  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
           MGK     N+ VI HVD GKST T  L+ K G
Sbjct: 13  MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44



 Score = 27.9 bits (59), Expect = 1.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 293 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 388
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
           elongation factor 2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 842

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = +1

Query: 43  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
           MGK     N+ VI HVD GKST T  L+ K G
Sbjct: 13  MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44



 Score = 27.9 bits (59), Expect = 1.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 293 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 388
           + V +ID+PGH DF   +       D A+++V
Sbjct: 98  FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129


>SPBC1306.01c ||SPBC409.22c|translation elongation factor
           G|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 770

 Score = 34.3 bits (75), Expect = 0.019
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +2

Query: 278 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 448
           FE S Y + IID PGH DF   +       D AVL++ A +G     I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196



 Score = 29.1 bits (62), Expect = 0.72
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 67  NIVVIGHVDSGKSTTTGHLIYKCGGI 144
           NI +  H+DSGK+T T  ++Y  G I
Sbjct: 61  NIGISAHIDSGKTTFTERVLYYTGRI 86


>SPBC1271.15c |||translation initiation factor
           IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 686

 Score = 33.5 bits (73), Expect = 0.033
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 278 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 403
           F+    ++T +D PGH  F      G + AD  VL+VA   G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256


>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 983

 Score = 31.9 bits (69), Expect = 0.10
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +2

Query: 236 LSVSRYPIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 388
           +S+   P+ +A+   +   +    ID PGH DF+  +    + +D  VL+V
Sbjct: 190 MSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240


>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 646

 Score = 30.7 bits (66), Expect = 0.23
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +2

Query: 269 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 403
           ++ +    Y + +ID PGH DF   ++   +  +  +L+V A  G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160


>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1000

 Score = 30.7 bits (66), Expect = 0.23
 Identities = 23/74 (31%), Positives = 37/74 (50%)
 Frame = +2

Query: 293 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 472
           Y + +ID+PGH DF   + + +   D A ++V A  G     I+   Q       A+   
Sbjct: 94  YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQ-------AWIDR 146

Query: 473 VKQLIVGVNKMDPL 514
           +K ++V +NKMD L
Sbjct: 147 IKVILV-INKMDRL 159


>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 813

 Score = 29.9 bits (64), Expect = 0.41
 Identities = 26/84 (30%), Positives = 38/84 (45%)
 Frame = +2

Query: 257 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 436
           I+ A   F      + +ID PGH DF   +    +  D AV I+     +  AG+    Q
Sbjct: 81  INSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQ 133

Query: 437 TREHALLAFTLGVKQLIVGVNKMD 508
           T+     A   G+ ++I  VNKMD
Sbjct: 134 TKVVWKQATKRGIPKVIF-VNKMD 156



 Score = 28.7 bits (61), Expect = 0.95
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 67  NIVVIGHVDSGKSTTTGHLIYKCG 138
           N+ +I H+D+GK+T T  ++Y  G
Sbjct: 30  NVGIIAHIDAGKTTLTEKMLYYGG 53


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 29.5 bits (63), Expect = 0.54
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 305 IIDAPGHRDFIKNMITGTSQADCAVLIV 388
           IID PGH  F      GTS  + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580


>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 662

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 19/62 (30%), Positives = 24/62 (38%)
 Frame = -1

Query: 286 SFELPESNIDWIPTHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWW 107
           S  L   N D    +    V  +PK I  I++ F  P S  S    C+Y     S D  W
Sbjct: 12  SSNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71

Query: 106 WT 101
            T
Sbjct: 72  RT 73


>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1115

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 148 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERESVSNRY 264
           +R IEKFEK  +E  +    +   ++KL  E   +S RY
Sbjct: 577 EREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERY 615


>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 380

 Score = 25.4 bits (53), Expect = 8.8
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 257 IDIALWKFETSKYYV--TIIDAPGHRDFIKN 343
           I+I   + E   +++  T+ID PG  DFI N
Sbjct: 73  IEITKAELEEKNFHLRLTVIDTPGFGDFINN 103


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,173,218
Number of Sequences: 5004
Number of extensions: 68752
Number of successful extensions: 245
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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