Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b21
(719 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 239 2e-64
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 128 8e-31
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 121 1e-28
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 110 2e-25
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 87 2e-18
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 79 5e-16
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 46 5e-06
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 45 1e-05
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 37 0.003
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 36 0.008
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.17
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.51
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.88
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 1.2
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 28 1.2
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 28 1.5
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 2.7
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 2.7
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.6
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 27 3.6
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 3.6
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 3.6
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 4.7
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 26 4.7
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 6.2
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.2
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 239 bits (586), Expect = 2e-64
Identities = 111/145 (76%), Positives = 130/145 (89%)
Frame = +1
Query: 106 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 285
LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGTI
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 286 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 465
DF EFLTMMARKMKDTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +
Sbjct: 66 DFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVAD 125
Query: 466 MIREADIDGDGQVNYEEFVTMMTSK 540
MIREAD DGDG +NYEEF +++SK
Sbjct: 126 MIREADTDGDGVINYEEFSRVISSK 150
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 128 bits (309), Expect = 8e-31
Identities = 65/144 (45%), Positives = 94/144 (65%)
Frame = +1
Query: 109 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 288
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+ ID
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAID 59
Query: 289 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 468
+F++ ++ K+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV M
Sbjct: 60 EKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLM 119
Query: 469 IREADIDGDGQVNYEEFVTMMTSK 540
++EAD G +Y +FV + +K
Sbjct: 120 VQEADPTNSGSFDYYDFVQRIMAK 143
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 121 bits (291), Expect = 1e-28
Identities = 57/143 (39%), Positives = 85/143 (59%)
Frame = +1
Query: 103 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 282
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 283 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 462
+ +F+ +M K+ + D EEI+ AF +FD D G IS LR V L E + D+E++
Sbjct: 90 LQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELE 149
Query: 463 EMIREADIDGDGQVNYEEFVTMM 531
MI E D+D DG++N +EF+ +M
Sbjct: 150 AMIEEFDLDQDGEINEQEFIAIM 172
Score = 52.0 bits (119), Expect = 8e-08
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +1
Query: 334 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 513
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 514 EFVTMMTSK 540
+FV +MT K
Sbjct: 94 DFVRVMTEK 102
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 110 bits (264), Expect = 2e-25
Identities = 57/136 (41%), Positives = 89/136 (65%), Gaps = 2/136 (1%)
Frame = +1
Query: 130 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 309
+K+AFSLFD+ G G I +G ++R+ GQNPT AE+ ++ + + A+ +D +FL +
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDMEQFLQV 63
Query: 310 MARKMK-DTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 483
+ R D + EE + F+VFDKD G I ELR+V+T+LGEKL++EE+DE+++
Sbjct: 64 LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 123
Query: 484 IDGDGQVNYEEFVTMM 531
+ DG VNY +FV M+
Sbjct: 124 VK-DGMVNYHDFVQMI 138
Score = 41.9 bits (94), Expect = 9e-05
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +1
Query: 127 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 306
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V +G +++ +F+
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQ 136
Query: 307 MM 312
M+
Sbjct: 137 MI 138
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 87.0 bits (206), Expect = 2e-18
Identities = 49/140 (35%), Positives = 77/140 (55%)
Frame = +1
Query: 103 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 282
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E D IN + N
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASE----DSINHMFESINPP 96
Query: 283 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 462
I+ FLT M + ++ EAF FD +G I + +R ++++G+++ +EV+
Sbjct: 97 INLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVE 156
Query: 463 EMIREADIDGDGQVNYEEFV 522
++R G YE+FV
Sbjct: 157 SILR--SYTSHGVFYYEKFV 174
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 394 ISAAELRHVMTNLGEKLTDEEVDEMIREA----DIDGDGQVNYEEFVTMMTS 537
++A + + +LT ++ E+ +EA D DGDG + E+ TM+TS
Sbjct: 26 VAAQAAKRASSGAFAQLTSSQIQEL-KEAFALLDKDGDGNIGREDVKTMLTS 76
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 79.4 bits (187), Expect = 5e-16
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Frame = +1
Query: 109 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 288
+ E+I ++ F D + G+I E ++ S+ NP + L + VD DG G +D
Sbjct: 19 SNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVD 74
Query: 289 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDE 453
F EF+ ++ + EE+++ AF+++D D +G+IS EL V+ TNL E +
Sbjct: 75 FQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQ 134
Query: 454 EVDEMIREADIDGDGQVNYEEF 519
VD+ I E D D DG++++EEF
Sbjct: 135 IVDKTIMEVDKDRDGKISFEEF 156
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 46.0 bits (104), Expect = 5e-06
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +1
Query: 310 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 489
M+ K + +EE EAF +FD G+I +LR LGE LT E++ M+ D+
Sbjct: 1 MSVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLA 57
Query: 490 G-DGQVNYEEFVTM 528
G +G+V+ EEF +
Sbjct: 58 GTNGKVSREEFAEL 71
Score = 34.7 bits (76), Expect = 0.013
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +1
Query: 115 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 294
E E +EAF LFD G I ++L LG+N T+ +LQ M++ A NG +
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL--AGTNGKVSRE 66
Query: 295 EF 300
EF
Sbjct: 67 EF 68
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 45.2 bits (102), Expect = 1e-05
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Frame = +1
Query: 247 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV-- 420
+ N DAD NG IDF EF+ ++ + + +++ AF+++D D NG IS E+ +
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRG-ELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 421 ----MTNLGEKLTDEE------VDEMIREADIDGDGQVNYEEF 519
M KL ++E V+++ D + DGQ+ EEF
Sbjct: 127 AIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 31.1 bits (67), Expect = 0.17
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +1
Query: 274 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 453
+G ++ EF + + D F VFD D NG+I E ++ ++
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Query: 454 EVDEMIREADIDGDGQVNYEEFVTMM 531
++ + D+D +G ++Y+E + ++
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEMLRIV 125
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 36.7 bits (81), Expect = 0.003
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +1
Query: 238 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 417
L D N++D DG G +D P T+ A + S +E+REA R + D +G + +
Sbjct: 21 LTDQFNKLDVDGKGYLDQP--TTIKAFEDSKKGSYDEVREAIREVNVDSSGRVEPEDFVG 78
Query: 418 VMTNLGEKLTDEEV 459
+ L + + EV
Sbjct: 79 IFNVLKKGVEGTEV 92
Score = 35.9 bits (79), Expect = 0.006
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 310 MARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 483
+ +K + +EE + + F D DG G++ + +K + +EV E IRE +
Sbjct: 6 LQKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVN 64
Query: 484 IDGDGQVNYEEFV 522
+D G+V E+FV
Sbjct: 65 VDSSGRVEPEDFV 77
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 35.5 bits (78), Expect = 0.008
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +1
Query: 328 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 507
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 508 YEEFVTMM 531
++EF M
Sbjct: 59 FDEFAIAM 66
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.17
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -3
Query: 495 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 361
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.51
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 495 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 349
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 28.7 bits (61), Expect = 0.88
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = +1
Query: 232 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 411
A +++ V + N ID E + K+ + ++ E V +DG+ I+ E
Sbjct: 318 ARYNELVQAVSSSSNSEIDEVEDAETIDSKILEKRNDLNNEEPNSVVAEDGSEIITLDEN 377
Query: 412 RHVMTNLGEKLTDEEVDEMIR 474
EKL D +++E ++
Sbjct: 378 DQSPNEATEKLRDNDLEESLK 398
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 100 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 261
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 28.3 bits (60), Expect = 1.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 250 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 378
I+E D + NG + F + + +KD+ EE+ ++F + D+
Sbjct: 545 ISESDDESNGDMIRDSFDRLSSESIKDSQKTEELHDSFGINDE 587
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 627 SNTMLILCVMKQNVYLNSLLFTHTLAGGSLRRHHGDE 517
S T+L + +M QN +LN+ F H A + R+ + +E
Sbjct: 199 SQTVLEILLMNQNSFLNNFNFEHIKADFAFRQKNYEE 235
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 418 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 516
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 2.7
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 313 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 489
AR++K I + ++ D+ + +A EL V LG+ +TD VDE +A+++
Sbjct: 113 ARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEV---LGQNMTDINVDEEELDAELE 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 370 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 483
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = -3
Query: 585 YLNSLLFTHTLAGGSLRRHHGDELFVIDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 406
Y L T+ G + E+ I+ V DIG + + +F + D +L
Sbjct: 172 YCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKDKPEL 231
Query: 405 GRGDEAVAVLVE 370
GD ++ L+E
Sbjct: 232 YEGDRSLESLIE 243
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 3.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 244 LEVRLLWGSVLATSSRCPALWS*WCHR 164
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 370 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 483
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/85 (22%), Positives = 31/85 (36%)
Frame = +1
Query: 136 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA 315
+ F FD+D DG + +EL + R P N + +G + + +L +
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFRHTPGLPEIWVSSQFPNSTVLNEHGYVTYNGWLAQWS 370
Query: 316 RKMKDTDSEEEIREAFRVFDKDGNG 390
A+ FD DG G
Sbjct: 371 MITLFDYKTTLAYLAYLGFDTDGRG 395
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 172 TITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 348
T + GT+ S+G + E + ++++ T DFPE L+ +++ EE
Sbjct: 545 TTSLHPFGTLYESIGTIGDPKVEYKAILHDFSCH---TYDFPESLSHCVKRLPTPIPAEE 601
Query: 349 IREAFRVFDK 378
+++ + + DK
Sbjct: 602 LQKRYNLRDK 611
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 6.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 507 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 406
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 585 YLNSLLFTHTLAGGSLRRHHGDELFVIDLAVAV 487
YLNSLL H G L++ H + LAVA+
Sbjct: 299 YLNSLLSVHEKDGVLLQKFHNSYVQYQKLAVAL 331
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,357,536
Number of Sequences: 5004
Number of extensions: 42923
Number of successful extensions: 187
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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