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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0062
         (708 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M...    38   0.002
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac...    32   0.070
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi...    32   0.092
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch...    31   0.12 
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha...    31   0.16 
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch...    30   0.28 
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei...    30   0.28 
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo...    30   0.37 
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF...    29   0.49 
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch...    29   0.49 
SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac...    29   0.49 
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc...    29   0.65 
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb...    29   0.86 
SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re...    29   0.86 
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    29   0.86 
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p...    29   0.86 
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig...    28   1.1  
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc...    28   1.1  
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch...    28   1.5  
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy...    27   2.0  
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc...    27   3.5  
SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe...    27   3.5  
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos...    26   4.6  
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy...    26   4.6  
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar...    26   4.6  
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc...    26   4.6  
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom...    26   6.1  
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po...    26   6.1  
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe...    26   6.1  
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy...    26   6.1  
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr...    26   6.1  
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual      25   8.0  
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual        25   8.0  
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp...    25   8.0  
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ...    25   8.0  
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy...    25   8.0  
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c...    25   8.0  
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo...    25   8.0  
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar...    25   8.0  
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha...    25   8.0  
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|...    25   8.0  
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1...    25   8.0  
SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyce...    25   8.0  

>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 500

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
 Frame = +1

Query: 97  ATMADAAVDKKEVAPEEVTSTEPKESPV---KKSPAKKVEAAESNGKENGTDEAPEDSPA 267
           ++  D +  K +   +  +S EP +  V   KKS  K+  ++ES  + + ++     S +
Sbjct: 44  SSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSES 103

Query: 268 ENGDAEESNDASENGDATEKKETGVK 345
           E+  +E  + +SE+  +  ++E  VK
Sbjct: 104 ESSSSESESSSSESSSSESEEEVIVK 129



 Score = 33.1 bits (72), Expect = 0.040
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +1

Query: 121 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND- 297
           +KKE + +  + +   ES  + S ++  E  E   K   T+E  E S   + D+E S+D 
Sbjct: 158 EKKESSSDSSSESSSSESESESSSSESEEEEEVVEK---TEEKKEGSSESSSDSESSSDS 214

Query: 298 ASENGDATEKKET 336
           +SE+GD+    ++
Sbjct: 215 SSESGDSDSSSDS 227



 Score = 29.9 bits (64), Expect = 0.37
 Identities = 18/83 (21%), Positives = 41/83 (49%)
 Frame = +1

Query: 106 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 285
           ++++  + E   E V  TE K+    +S +   E++  +  E+G  ++  DS +E+   +
Sbjct: 177 SESSSSESEEEEEVVEKTEEKKEGSSESSSDS-ESSSDSSSESGDSDSSSDSESESSSED 235

Query: 286 ESNDASENGDATEKKETGVKRKS 354
           E    +E   A+E++   + + S
Sbjct: 236 EKKRKAE--PASEERPAKITKPS 256


>SPAC23C4.02 |crn1||actin binding protein, coronin
           Crn1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 601

 Score = 32.3 bits (70), Expect = 0.070
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 124 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP-AENGDAEE 288
           K+E  P E +  +P  SPV  S   K E +E   K   +DEAP+ +P AE+   EE
Sbjct: 485 KREKTPVEKSFPKPASSPVTFSEDVKKEPSEEK-KLEVSDEAPKAAPLAESKKVEE 539



 Score = 27.5 bits (58), Expect = 2.0
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 139 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEES 291
           PE    ++PKES  ++ P+K+ E   +    +  +E  +    +N   EE+
Sbjct: 430 PEAQPVSKPKESAEEQKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQKEET 480


>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 451

 Score = 31.9 bits (69), Expect = 0.092
 Identities = 14/60 (23%), Positives = 35/60 (58%)
 Frame = +1

Query: 142 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDAT 321
           E  +S+E  +S    S ++   +++ +   + + ++ +DS +++ D+ ES  +SE+ D+T
Sbjct: 244 ESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDS-ESESSSEDSDST 302



 Score = 29.9 bits (64), Expect = 0.37
 Identities = 13/62 (20%), Positives = 28/62 (45%)
 Frame = +1

Query: 151 TSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKK 330
           + +E + S      +     +ES     G+D +   S +E+  + E ND+S +   +E +
Sbjct: 133 SDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 192

Query: 331 ET 336
            +
Sbjct: 193 SS 194



 Score = 29.9 bits (64), Expect = 0.37
 Identities = 13/62 (20%), Positives = 28/62 (45%)
 Frame = +1

Query: 151 TSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKK 330
           + +E + S      +     +ES     G+D +   S +E+  + E ND+S +   +E +
Sbjct: 187 SDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 246

Query: 331 ET 336
            +
Sbjct: 247 SS 248


>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 867

 Score = 31.5 bits (68), Expect = 0.12
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 172 SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 318
           +P+K+ PAK         ++  +  A   SPA NG     N+AS +  A
Sbjct: 113 TPLKRGPAKGFNRNADEKQKRASGSAKSSSPAVNGSVFSGNEASPSSRA 161


>SPBC23E6.09 |ssn6||transcriptional corepressor
            Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1102

 Score = 31.1 bits (67), Expect = 0.16
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +1

Query: 127  KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN-GDAEESNDAS 303
            ++V   ++TS EPK   + KSP +K +   ++     T++   DS  +N    ++S DA 
Sbjct: 973  EQVDSAQLTS-EPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNMDNVATVDKSTDAV 1031

Query: 304  ENGDAT 321
            +   AT
Sbjct: 1032 DTSTAT 1037


>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 764

 Score = 30.3 bits (65), Expect = 0.28
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 205 EAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 315
           E++E + ++N TDEA ED+ +   D     + S + D
Sbjct: 355 ESSEDDDEDNNTDEANEDAQSNVSDESPKGEGSSHSD 391


>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
           Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 348

 Score = 30.3 bits (65), Expect = 0.28
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +1

Query: 166 KESPVKKSPAK-KVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGV 342
           K  PV++ P K + ++   NG+E  T  + E++ +  G ++E N+A+     +  +  GV
Sbjct: 123 KARPVQEQPIKDRKKSKNKNGEEPETSTSVENAESAKGSSDE-NEANTATAPSSNEANGV 181

Query: 343 KRK 351
            +K
Sbjct: 182 DKK 184


>SPAC56F8.03 |||translation initiation factor IF2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1079

 Score = 29.9 bits (64), Expect = 0.37
 Identities = 22/76 (28%), Positives = 28/76 (36%)
 Frame = +1

Query: 130 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASEN 309
           E +P    S +  +   K    K  +  E   KE    EA           EE   A  N
Sbjct: 374 ESSPATSISVDEPQKDSKDDSEKVEKETEVERKEENEAEAEAVFDDWEAALEEPEVAENN 433

Query: 310 GDATEKKETGVKRKSV 357
              TEKKET +K  +V
Sbjct: 434 EVVTEKKETDIKSDAV 449


>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
           eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 918

 Score = 29.5 bits (63), Expect = 0.49
 Identities = 17/60 (28%), Positives = 34/60 (56%)
 Frame = +1

Query: 148 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEK 327
           V ++E  ES  + S  ++ E  ES      +DE+  +S +E+ ++EE +++ E  D +E+
Sbjct: 75  VAASEDSESDSESS--EEEEETESEEDSEVSDESESESESES-ESEEESESEEESDESER 131


>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 867

 Score = 29.5 bits (63), Expect = 0.49
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +1

Query: 148 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 315
           +  +EP +    K+   K + +E+  +  G D+  E+   ++ D +E  D  E+ +
Sbjct: 169 IQPSEPHDVDTSKNGLSKKQHSEAQPEVQGNDDEVEEEDDDDDDEDEDEDEDEDNN 224


>SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor
           complex subunit Spp27|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 233

 Score = 29.5 bits (63), Expect = 0.49
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +1

Query: 142 EEVTSTEPKESPVKKSPAKKVEA--AESNGKENGTDEAPEDSPAENGDAEESNDASENGD 315
           +E  +   KES  K++PA+K +   A  NG E G   A      +  D EE      N D
Sbjct: 53  DETAAPSEKESLEKQAPARKTKGKRATENGTEEGKKPAKRTRKRKE-DGEEGGKRKRNQD 111


>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 822

 Score = 29.1 bits (62), Expect = 0.65
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 130 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 288
           ++ PE+    + +  PVKK P+KK + A++N  E   DE   +   E  D+E+
Sbjct: 58  DLKPED-DEVDEEVVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEE-DSEK 108


>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 2685

 Score = 28.7 bits (61), Expect = 0.86
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +1

Query: 184  KSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKR 348
            K P+ K  +  S+  +NG+D    DS + N     SN  +EN +A ++K   + R
Sbjct: 963  KDPSPKSASESSSFYQNGSDIDDNDSNSSN----TSNHTTENANAQQRKLEDLNR 1013


>SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1
           related|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 773

 Score = 28.7 bits (61), Expect = 0.86
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -1

Query: 666 QVLLQVKFNTQCIYYYINLNLNQTQKSSTLHSMRLSVWV*YICRSGICGC 517
           ++LL       C  ++  L+LN+ +    L  +R +    ++  SGICGC
Sbjct: 93  KLLLDAFEKKGCDVHFYALDLNEAELQKGLQELRQTTNYQHVKVSGICGC 142


>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 615

 Score = 28.7 bits (61), Expect = 0.86
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 145 EVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENG 312
           EV++ EP+  PVK+     V  ++  G+ + TD     +P E  +   S +  E G
Sbjct: 389 EVSANEPQPRPVKED----VPKSQVGGETDTTDVINNSTPKEETEESPSTELPETG 440


>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 275

 Score = 28.7 bits (61), Expect = 0.86
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +1

Query: 154 STEPKESPVKKSPAKKVE-----AAESNGKENGTDEAPEDSPAENGDAEESNDASENGDA 318
           S  P++SPV+      V+      +ESN K +GT+   + +P  NG+ EE N+    G  
Sbjct: 175 SFAPQKSPVENETETNVDNGDTKISESNEK-SGTEVEQQSAPNSNGN-EEVNNLEPVGQN 232

Query: 319 TEKKE 333
             K+E
Sbjct: 233 ESKQE 237


>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
           E3 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1647

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 211 AESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVAL 363
           +ES  ++   DE  E+   EN D  +  D +EN +   + E G    S A+
Sbjct: 241 SESYERDEDVDEEEEEDDDENNDEGDDEDENENDEL--RSENGSPNPSAAV 289


>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
           Bms1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1121

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +1

Query: 226 KENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVAL 363
           +EN +D   E+S   +  AE    A E    TE++E   K++ + L
Sbjct: 625 EENSSDNEMEESSGSSVTAENEESADEVDFQTEREENARKKEELRL 670


>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 525

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 351 FPLHTSLFLFCGITVLRCIVAFFGITIFS 265
           FP+   +F FC    +  IV+  G+TIF+
Sbjct: 398 FPIGIFMFAFCSKVHIHYIVSLIGLTIFN 426


>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1019

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 16/69 (23%), Positives = 35/69 (50%)
 Frame = +1

Query: 160  EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 339
            E  +S  + S  +  +A  S+ +E  ++E  ED+  E+G +E   +  E+G+  ++ E  
Sbjct: 939  EGDDSVEEVSEYEASDADPSDEEEEESEEYSEDASEEDGYSESEVEDEESGEDWDELERK 998

Query: 340  VKRKSVALD 366
             +++    D
Sbjct: 999  ARQEDAKHD 1007


>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1428

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 202 VEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKE 333
           VE  + NG +  + ++ +DS  ++ +  ESND S + DA  + +
Sbjct: 372 VEEIKKNGIQEDS-QSTDDSSKDDDNNSESNDMSPHNDAETRAD 414


>SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 412

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 590 RAQPFIV*GYQYGCNTFVGAGYVDVS*TLMGIDALQ 483
           RA P ++ G     N  + + Y D     MGIDAL+
Sbjct: 36  RAPPPVIDGSSVDANRIIRSDYADAVYCSMGIDALE 71


>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 642

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
 Frame = +1

Query: 148 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASE---NGDA 318
           + ++  K SPV       +  A +N +    +    +SP +    EE+N A     +  A
Sbjct: 527 LANSNSKSSPVAVQRVSTLPQASANKQAKEMESKMSNSPTQKSKTEENNQAVRAILDASA 586

Query: 319 TEKKETGVKR 348
           T +K+  + R
Sbjct: 587 TMEKQYDLHR 596


>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 542

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 133 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESN 294
           VAP  +TS +     V KS    VE+     +++ T   PED P+      ++N
Sbjct: 288 VAPSFITSDQAATPDVLKSEEAHVESFSKESEKDQT-PIPEDVPSPMDTLSQAN 340


>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 682

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 336 SLFLFCGITVLRCIVAFF-GITIFSRRIFWGFIGTILFA 223
           ++F    +    C+  FF G TI+   +F G +GT L A
Sbjct: 356 AVFFIFSLFFFLCMRNFFPGFTIYFPALFLGVVGTFLIA 394


>SPAC6B12.05c |||chromatin remodeling complex subunit
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 295

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
 Frame = +1

Query: 112 AAVDKKEVAPEEVTSTEPKESPV----KKSPAKKVEAAESNGKENGTDEAPEDSPAENGD 279
           A VD++E+  EE    +    PV    K S +K      S  K +      EDS    GD
Sbjct: 75  AQVDEEELEEEEEEEEDATPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDSENLEGD 134

Query: 280 AEESN 294
            E+ +
Sbjct: 135 EEDGS 139


>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 329

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 244 EAPEDSPAENGDAEESNDASENGDATEK 327
           E PEDS  E+G +E + D SE+G+  E+
Sbjct: 235 EPPEDS--EDGISEMNEDPSESGEMIEQ 260


>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 474

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
 Frame = +1

Query: 166 KESPVKKSPAKKVEAAESNGKENG-------TDEAPEDSPAENGDAEESNDA-SENGDAT 321
           K +PV    A  VE AE NG E+        + E  ED  A+  +     +A  E  +  
Sbjct: 403 KPAPVVAPAAPTVE-AEVNGVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKK 461

Query: 322 EKKETGVKRK 351
           EKKE   K+K
Sbjct: 462 EKKEKKEKKK 471


>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 565

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +1

Query: 163 PKES-PVKKSPAKKVEAAESNGKENGTDEAPEDSPAENG-DAEESNDASENGDAT-EKKE 333
           PK S P   +PA  V A +S    NG     E+   ENG D   SND+  +G    E+ E
Sbjct: 396 PKSSFPTSSTPAS-VGAEKSEETSNGNKSEQEEK--ENGNDETRSNDSLVSGKGKGEENE 452

Query: 334 TGV 342
             V
Sbjct: 453 DSV 455


>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 20/86 (23%), Positives = 35/86 (40%)
 Frame = +1

Query: 100 TMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGD 279
           T A+ ++D          S++P E+P   S   K +  E++ K+   +E  +   AE   
Sbjct: 333 TEAEQSIDVSSDIGLRSDSSKPNEAPT-SSENIKADQPENSTKQENPEEDMQIKDAEEHS 391

Query: 280 AEESNDASENGDATEKKETGVKRKSV 357
             ES  A++     E      K  S+
Sbjct: 392 NLESTPAAQQTSEVEANNHQEKPSSL 417


>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 872

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 115 AVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPED 258
           ++D+   +P  ++S   K SP  K+ +K  ++A +      TDE P D
Sbjct: 592 SLDENVNSPTSISSPSSKSSPFTKTTSKDTKSATT------TDERPSD 633


>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 408

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 21/73 (28%), Positives = 30/73 (41%)
 Frame = +1

Query: 136 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGD 315
           A EE +      SP + S   K +  E +  ENG      +   +N D E   DA  NG 
Sbjct: 144 ADEEGSEISVPSSPKRMSFNLKEDMEEGDFDENG------NFIRKNYDPESQYDAWLNGS 197

Query: 316 ATEKKETGVKRKS 354
            + KK     R++
Sbjct: 198 VSNKKSIAAAREA 210


>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 4717

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 166  KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESN 294
            +E    +S   + EA E     NG  +    S  EN D+EE N
Sbjct: 3939 EEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEEN 3981


>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
           Spt6|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1365

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 259 SPAENGDAEESNDASENGDAT 321
           SP  NGD  E    +ENG+ T
Sbjct: 9   SPTTNGDKNEDGYPAENGEGT 29


>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 599

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
 Frame = +1

Query: 139 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAE---NGDAEESND-ASE 306
           P E  +TE +   + +S    + ++ S   +   D    DSP +   N +    +D  SE
Sbjct: 351 PSENDTTESENDTLSESSTTSISSSPSENSDTSDDLTKVDSPNKSLVNDNVSAKHDKESE 410

Query: 307 NG 312
           NG
Sbjct: 411 NG 412


>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 606

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 20/79 (25%), Positives = 40/79 (50%)
 Frame = +1

Query: 124 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDAS 303
           +KEV  +  T  E ++S  +   A+K EA+ +  +E  +    +++  ++   EES+  S
Sbjct: 522 QKEVKEKRNTRREKRKSKKEFLKAQKNEASNNLKQEIVSKAGAQETENDDLIDEESDALS 581

Query: 304 ENGDATEKKETGVKRKSVA 360
           E  +   + +   KRK+ A
Sbjct: 582 ELEEDYRQLKKSKKRKNQA 600


>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 329

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = -3

Query: 316 HHRSQMHRCFLR--HHHFQQANLLGL--HRYHSL-CHY 218
           HH SQ ++C LR  HH     N +G   H++  L C Y
Sbjct: 111 HHCSQCNKCILRMDHHCMWFKNCVGFRNHKFFFLECFY 148


>SPBC947.07 |||ribosome biogenesis protein
           Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 233

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 166 KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 297
           KE    ++ AKK+   ES  K+     A +   + +  A+E ND
Sbjct: 41  KEKAKARAEAKKLAKKESKAKQESKVAAYDTGNSSDNIADEEND 84


>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 253 EDSPAENGDAEESNDASENGDATEKKETGVKRKS 354
           E+   E+    E NDA+E G +  +K+   K+KS
Sbjct: 22  ENDVVEDDGKVEENDAAEEGASNGEKKKKKKKKS 55


>SPCC364.06 |nap1||nucleosome assembly protein Nap1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 393

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +1

Query: 178 VKKSPAKKVEAAESNGKE--NGTDEAPEDSPAENGDAEESNDASENGDATEKKETG 339
           ++K+ AKK         E   G DE P +   + G+A + N+  E   +  KK+ G
Sbjct: 103 LEKAYAKKYAPIFKRRSEVVRGADE-PTEEEIKKGEAADENEKKEPTSSESKKQEG 157


>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 207

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 18/60 (30%), Positives = 28/60 (46%)
 Frame = +1

Query: 187 SPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASENGDATEKKETGVKRKSVALD 366
           +P K+ E AE+           +D   +  DAEE    S+ G  T KKE   +++  AL+
Sbjct: 3   NPKKRAEKAEA------AKSRKQDEEKKKKDAEEDEKWSK-GVKTNKKEQEAEKRKAALE 55


>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1023

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 160  EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 273
            E +ESP+K  P KK      +  E  T +    SP E+
Sbjct: 892  ETRESPMKNKPTKKQHKRAFSMFERPTSQKAPLSPVES 929


>SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 568

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 109 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA 267
           + A  KK  A E   +   + +  K++ AK++EAA+     N   + P+D+PA
Sbjct: 80  EQAAKKKAKAAEAEAAAAARAAAAKEAEAKRLEAAK-----NIVLKEPKDAPA 127


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,403,759
Number of Sequences: 5004
Number of extensions: 43265
Number of successful extensions: 239
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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