Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120072.Seq
(723 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 68 2e-12
SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 45 1e-05
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 39 6e-04
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc... 38 0.001
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 36 0.004
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 36 0.006
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 36 0.008
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 35 0.010
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 35 0.014
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch... 33 0.031
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 32 0.095
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 32 0.095
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual 31 0.17
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 30 0.29
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 30 0.38
SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces ... 29 0.51
SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity... 29 0.89
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 29 0.89
SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyc... 28 1.2
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 27 2.7
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 26 6.3
SPBC2D10.11c |||nucleosome assembly protein Nap2 |Schizosaccharo... 26 6.3
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 25 8.3
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 25 8.3
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 67.7 bits (158), Expect = 2e-12
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E ++ DL + FG + ++YLAK+K TG KGFA+V + R A KA L+G+G+++LIL
Sbjct: 215 EEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDGYGWNNLILR 274
Query: 699 VEWSKP 716
E+SKP
Sbjct: 275 CEFSKP 280
Score = 54.0 bits (124), Expect = 2e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Frame = +2
Query: 2 GLKIVTEYKYDNDNKKVKIVRTYKIEKCVVSK----SIAKRKTWSKFGDSASDKPGPNPA 169
G K + E++ D++ KKVK+ R I K V+++ ++A+RK W KFG A G +
Sbjct: 30 GTKTMIEFRIDDNGKKVKVTRV--IRKTVITERVQHAVAERKKWKKFGKEAGKNSGVDAR 87
Query: 170 TTNVAEDVFMQ----FITSKEESQ 229
TT+V E+V ++ + T+KEE Q
Sbjct: 88 TTSVGENVQLRLQLGWTTTKEEEQ 111
Score = 35.9 bits (79), Expect = 0.006
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Frame = +1
Query: 256 LKPPSSNVIFKCRTCQGDHLTLYCPFKH----TQIXXXXXXXXXXXXXXXXXXSNKYIPP 423
+K S+V+ +CR C+G+H T CP+K +YI P
Sbjct: 121 VKAKGSSVV-RCRACKGNHFTAQCPYKSIIGPVDEPPLDASPVSSRASGALGEKGRYIAP 179
Query: 424 ---SSAGRIPGRDQPPVRREDVTAIRISNLS 507
+ +GR G R+D +R++NLS
Sbjct: 180 HLRAGSGRESGDSMFKRERDDSATLRVTNLS 210
>SPAC23A1.09 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 121
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 513 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDH-L 689
A E ++DL FGPV L+L ++ TG+ KG+A + + A KA+ N D L
Sbjct: 21 ATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEYATLEQAQKAVDEKNLSLLDEKL 80
Query: 690 ILNVEWSKPPQ 722
++ + +PP+
Sbjct: 81 EVDFAFLEPPE 91
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 39.1 bits (87), Expect = 6e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E D+ L FG + ++++ +K T + KGFAY+ F DA +A L+ + +L+
Sbjct: 336 EDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLELDAKPFQGRLLH 395
Query: 699 V 701
V
Sbjct: 396 V 396
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 606 GFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 710
GF +V FK +A A A+ ++NG D L ++ S
Sbjct: 666 GFGFVEFKDKASAVAAMHAMNGFVLDGHKLEIKLS 700
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 573 LAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
+AK K G + FA++ FK DA KAI+ LN
Sbjct: 37 VAKTKE-GVSRRFAFIGFKNEEDADKAIRYLN 67
>SPAC328.05 |||RNA-binding protein involved in export of
mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 534 DLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGY 680
DL G V + +A E TG KGF V F+ DAA +I+ LNG+ Y
Sbjct: 298 DLFTDIGSVIRARIAYEP-TGRSKGFGVVQFENENDAASSIEKLNGYRY 345
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 36.3 bits (80), Expect = 0.004
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E ++ + FG V + + +E T +GF ++ F +A AI +LN + +LN
Sbjct: 114 EDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLN 173
Query: 699 VEWSK 713
V+ +K
Sbjct: 174 VQKAK 178
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 35.9 bits (79), Expect = 0.006
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E + D+ K GPV L + +G KG+ + + A AA A+++LN + L
Sbjct: 18 EEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAVRNLNNYDAGTRRLR 77
Query: 699 VEWSKPPQ 722
V++ Q
Sbjct: 78 VDFPTADQ 85
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
EA + +L GPV + + ++ T G+AYV+F D KA+ LN
Sbjct: 93 EAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELN 142
Score = 31.1 bits (67), Expect = 0.17
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGY 680
E + DL FG + L L K+++ +GF +V++ A KA+ LN Y
Sbjct: 274 EQEFSDLFGQFGEITSLSLVKDQNDKP-RGFGFVNYANHECAQKAVDELNDKEY 326
Score = 30.3 bits (65), Expect = 0.29
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
+ D FG + +A ++ G+ KG+ +VHF A AI+ +NG
Sbjct: 184 LHDTFSAFGKILSCKVAVDE-LGNAKGYGFVHFDSVESANAAIEHVNG 230
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 35.1 bits (77), Expect = 0.010
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 528 IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
+++L FG + LA ST KG+ +V F +A +AI +LNG
Sbjct: 437 LEELFSKFGRIKSCTLASYPSTEISKGYGFVSFSHPFEAVQAINTLNG 484
Score = 33.5 bits (73), Expect = 0.031
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +3
Query: 522 ADIDDLVKGFGPVHKLYLA---KEKSTGHCKG--FAYVHFKFRADAAKAIQSLNGHGYDH 686
+D+ +L + FG K ++ K KST FA++ F+ + A AI SLNG +
Sbjct: 34 SDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSADNAIASLNGSSFQG 93
Query: 687 LILNVEWS 710
L VE++
Sbjct: 94 NTLKVEYT 101
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 34.7 bits (76), Expect = 0.014
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 549 FGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWS 710
FG V ++ + K G GFA+V K R A +A+ SLNG D + V+W+
Sbjct: 131 FGKVREIKIPT-KGGGRMCGFAFVWMKDRKAAEEAMNSLNGTEIDGRPIAVDWA 183
>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 261
Score = 33.5 bits (73), Expect = 0.031
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
E+DI+ +GP+ ++ + + K TG G+A+V F+ D A ++ G
Sbjct: 113 ESDIEREFTRYGPIERIRVVRNKVTGKSMGYAFVVFERERDLKVAYKASAG 163
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 31.9 bits (69), Expect = 0.095
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
++ ++DL FG + LA ++G KG+ +V F+ A +A +LNG
Sbjct: 397 KSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVRAKDTLNG 447
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 31.9 bits (69), Expect = 0.095
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 525 DIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
++ D + GPV + ++K +G KG AYV F D+ +A +L+G
Sbjct: 255 ELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEF-CHEDSVQAAIALSG 302
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 507 HFAV-EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNG 671
HF + + D+ + + FG + ++L ++ KGF Y+ ++ A A++ +NG
Sbjct: 348 HFNLTDEDVKAIFEPFGDIEFVHLQRDDQN-RSKGFGYIQYRNPISARNALEKMNG 402
>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 31.1 bits (67), Expect = 0.17
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHF 626
G V+++ + +K TGH KGFAY+ F
Sbjct: 79 GSVNRVTILCDKFTGHPKGFAYIEF 103
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 30.3 bits (65), Expect = 0.29
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 606 GFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSKPPQ 722
G A+V F + D KAI++LNG D + V+ ++P Q
Sbjct: 90 GIAFVTFNNQEDVDKAIETLNGKTLDDREIVVQKARPVQ 128
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 558 VHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVE 704
+ ++ L E+ G +GF +V F D ++AI+ +NG L L V+
Sbjct: 245 IRRIKLRGEQRRG--RGFGFVSFANAEDQSRAIEEMNGKQVGDLTLVVK 291
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 29.9 bits (64), Expect = 0.38
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQ 659
+AD+ + G + ++ L + TG CKGF +V F KA++
Sbjct: 241 DADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAME 287
>SPBC16A3.18 |cip1||RNA-binding protein Cip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 490
Score = 29.5 bits (63), Expect = 0.51
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 510 FAVEAD-IDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDH 686
F++E D + D K G G +G A+ +F +A +Q+LNG+ +
Sbjct: 211 FSLEKDTLLDHFKQLGIPRPYAFNYHYDNGIFRGLAFANFYRPEEAQVVVQTLNGYEING 270
Query: 687 LILNVEWSK 713
L VEW +
Sbjct: 271 RRLRVEWKR 279
>SPBC3B9.11c |ctf1||mRNA cleavage and polyadenylation specificity
factor complex subunit Ctf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 363
Score = 28.7 bits (61), Expect = 0.89
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
E + ++ GPV L + TG KG+ + F A A++ LN
Sbjct: 20 EQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKLN 69
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 28.7 bits (61), Expect = 0.89
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 594 GHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILNVEWSK--PP 719
G +G A+ +F +A +Q LNG+ L VEW + PP
Sbjct: 270 GVFRGLAFANFHSPEEAKTVVQVLNGYEITGRRLRVEWKRQLPP 313
>SPAC2F7.11 |nrd1|msa2|RNA-binding protein Nrd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 529
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 519 EADIDDLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLNGHGYDHLILN 698
E +I + ++ FGP+ ++ + E++ A+VHF A A KA+Q L LN
Sbjct: 219 EDEIREDLEPFGPIDQIKIVTERN------IAFVHFLNIAAAIKAVQELP--------LN 264
Query: 699 VEWSK 713
+WSK
Sbjct: 265 PKWSK 269
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 507 HFAVEADIDDLVKGFGP---VHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAI 656
+ A EA+ + L + FG + + + ++ T KGFAY+ FK KA+
Sbjct: 276 NLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKAL 328
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.8 bits (54), Expect = 6.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 41 NKKVKIVRTYKIEKCVVSKSIAKRKTWSKFGDSASDKPGP 160
NK + + IEK V K AKRK + + G K P
Sbjct: 172 NKSAQKLNNQPIEKSSVDKENAKRKRYVEEGTKQGQKKKP 211
>SPBC2D10.11c |||nucleosome assembly protein Nap2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 110 RKTWSKFG-DSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDVLSHHPAMLSL 286
+K+W+ F + + P + + A + Q + S+ E + D +L ++PAMLS+
Sbjct: 9 KKSWNGFAAQTPQNTPSSDVHLSKAALEKARQTLQSQLEDKSAHDEVSGLLRNNPAMLSM 68
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 534 DLVKGFGPVHKLYLAKEKSTGHCKGFAYVHFK 629
D + FG V + ++ +TG +GF ++ FK
Sbjct: 181 DYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFK 212
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 552 GPVHKLYLAKEKSTGHCKGFAYVHFKFRADAAKAIQSLN 668
GPV +++ +++ GF + F D A Q LN
Sbjct: 35 GPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILN 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,728,903
Number of Sequences: 5004
Number of extensions: 50968
Number of successful extensions: 150
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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