BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I09A02NGRL0001_D15 (591 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces p... 332 3e-92 SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 69 5e-13 SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 56 4e-09 SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|... 28 0.89 SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 28 1.2 SPBC1709.09 |||mitochondrial translation termination factor|Schi... 27 1.5 SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 26 4.7 SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 25 6.2 SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 6.2 SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces po... 25 8.3 >SPAC222.12c |atp2||F1-ATPase beta subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 525 Score = 332 bits (815), Expect = 3e-92 Identities = 163/189 (86%), Positives = 175/189 (92%) Frame = +3 Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMN 182 V I ELINN+AKAHGG+SVF GVGERTREGNDLY EM+ GVI + + SK +LV+GQMN Sbjct: 211 VFIQELINNIAKAHGGYSVFTGVGERTREGNDLYREMQETGVIKLEGE-SKAALVFGQMN 269 Query: 183 EPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 362 EPPGARARVALTGLT+AE+FRD EGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP Sbjct: 270 EPPGARARVALTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP 329 Query: 363 TLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 542 TLATDMG MQERITTTK GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR+I+ELG Sbjct: 330 TLATDMGAMQERITTTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSISELG 389 Query: 543 VYPAVDPLD 569 +YPAVDPLD Sbjct: 390 IYPAVDPLD 398 >SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces pombe|chr 1|||Manual Length = 619 Score = 68.9 bits (161), Expect = 5e-13 Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 10/178 (5%) Frame = +3 Query: 57 VFAGVGERTREGNDL---YHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLT 227 V+ G GER E ++ + E+ + + + +LV N P AR TG+T Sbjct: 281 VYVGCGERGNEMAEVLMDFPELTIDINGKPEPIMKRTTLVANTSNMPVAAREASIYTGIT 340 Query: 228 LAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI-- 401 LAE++RD +G++V + D+ R+ +A E+S L +P+ GY L + + ER Sbjct: 341 LAEYYRD-QGKNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGAKLASFYERAGR 399 Query: 402 -----TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560 + + G+++ V AV P D +DP + T + L + +A+ +P+++ Sbjct: 400 ARCLGSPDREGTVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSIN 457 >SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces pombe|chr 1|||Manual Length = 503 Score = 56.0 bits (129), Expect = 4e-09 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%) Frame = +3 Query: 153 KVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLG 332 +V+L N+P R L+ +E + + VL + ++ + A EVSA Sbjct: 234 RVTLFLNLANDPTIERIITPRLALSASEFLAYQTEKHVLTILTDMTSYADALREVSAARE 293 Query: 333 RIPSAVGYQPTLATDMGNMQERITTTKA--GSITSVQAVYVPADDLTDPAPATTFAHLDA 506 +P GY + TD+ + ER + GSIT + + +P DD+T P P T + Sbjct: 294 EVPGRRGYPGYMYTDLSTIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEG 353 Query: 507 TTVLSRAIAELGVYPAVDPL 566 + R + +YP ++ L Sbjct: 354 QIFVDRQLHNNAIYPPINVL 373 >SPBP19A11.03c |mts4|rpn1|19S proteasome regulatory subunit Mts4|Schizosaccharomyces pombe|chr 2|||Manual Length = 891 Score = 28.3 bits (60), Expect = 0.89 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +3 Query: 408 TKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGV 545 TKAG++ + V + DPA A +L+ +V RA A LG+ Sbjct: 439 TKAGALLGIGVTNVAVRNEADPAMAILSEYLETGSVKLRASAILGL 484 >SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 760 Score = 27.9 bits (59), Expect = 1.2 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = -3 Query: 373 VASVGWYPTADGILPSKADTS 311 V SV W+PT + IL S AD+S Sbjct: 271 VMSVDWHPTKEMILSSSADSS 291 >SPBC1709.09 |||mitochondrial translation termination factor|Schizosaccharomyces pombe|chr 2|||Manual Length = 244 Score = 27.5 bits (58), Expect = 1.5 Identities = 9/41 (21%), Positives = 21/41 (51%) Frame = +3 Query: 390 QERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATT 512 QE + G+ T ++A+++P+ + P P+ + A + Sbjct: 78 QEAVVLPSQGNFTQLEALFIPSKSIKAPTPSRLLREIAAVS 118 >SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 533 Score = 25.8 bits (54), Expect = 4.7 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = -3 Query: 328 SKADTSDPACVNLKILSINNSTSCPSL-SLKCSASVNPVRATLALAPGGSFI 176 S +D S VNL+ +++ NSTS ++ S K S+ V T+ L G +I Sbjct: 280 SSSDDSTFYSVNLESITVTNSTSSNNVQSSKRSSKDIEVNTTVTLDTGTVYI 331 >SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1033 Score = 25.4 bits (53), Expect = 6.2 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = -2 Query: 131 NNASDFHFMVEIVPLARPLPYAGKNRES 48 NN D+H +V+++P L ++GK +S Sbjct: 832 NNLLDYHVIVDLLPKLAHLYFSGKFPDS 859 >SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 1036 Score = 25.4 bits (53), Expect = 6.2 Identities = 28/123 (22%), Positives = 46/123 (37%) Frame = -3 Query: 568 SSGSTAGYTPSSAIARDRTVVASR*ANVVAGAGSVRSSAGTYTACTLVMEPALVVVIRSC 389 ++ +TA + S+ T + S + A + S SS+ Y +L+ S Sbjct: 235 TTSATATSSSISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSS 294 Query: 388 ILPMSVASVGWYPTADGILPSKADTSDPACVNLKILSINNSTSCPSLSLKCSASVNPVRA 209 + S P + T+ + L +S NST+ S S +SVN A Sbjct: 295 ANSTTATSASSTPLTS---VNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTA 351 Query: 208 TLA 200 T A Sbjct: 352 TSA 354 >SPBC16H5.02 |pfk1||6-phosphofructokinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 942 Score = 25.0 bits (52), Expect = 8.3 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +3 Query: 408 TKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 518 T G IT A+Y P D ++ HL AT L Sbjct: 766 TVGGLITGASAIYTPEDGISLDMLRKDIDHLKATFAL 802 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,598,386 Number of Sequences: 5004 Number of extensions: 55012 Number of successful extensions: 180 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 174 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 256184654 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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