Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00052
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0438 + 3475017-3475484 96 1e-20
01_03_0108 - 12628711-12629178 96 1e-20
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 75 2e-14
09_04_0554 + 18495073-18495175,18495794-18496032 75 2e-14
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 75 2e-14
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 75 2e-14
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 75 2e-14
06_03_1149 + 28018932-28020529,28020989-28021067 75 2e-14
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 75 2e-14
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 75 2e-14
04_04_1238 + 31997671-31998816 75 2e-14
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 75 2e-14
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 75 2e-14
02_01_0464 - 3340642-3342015,3342403-3342405 75 2e-14
01_06_0031 + 25760878-25761342 75 2e-14
01_06_0033 + 25765300-25765758 75 3e-14
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 74 5e-14
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 74 7e-14
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 74 7e-14
05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 72 2e-13
10_08_0470 - 18151326-18151769 69 2e-12
08_01_0566 - 5028512-5029150 56 1e-08
07_03_0447 + 18301421-18301520,18301900-18302060 49 2e-06
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 45 3e-05
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 40 8e-04
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 40 0.001
08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137 39 0.002
10_08_0796 + 20643667-20643912 38 0.003
10_08_0361 + 17207657-17207701,17208850-17209773 37 0.009
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639... 37 0.009
12_01_1007 - 10208034-10208165,10208376-10208480,10208612-102086... 33 0.12
10_02_0200 - 6672743-6673717,6676257-6676634,6677017-6677301,667... 33 0.12
03_06_0392 - 33583375-33583554,33583646-33584126,33584211-33584452 32 0.20
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 32 0.27
02_02_0500 - 10993675-10994067,10994434-10995738 30 1.1
05_01_0474 - 3797926-3798609 29 1.4
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 29 2.5
04_04_0281 + 24121267-24121537,24122567-24122799 28 3.3
11_03_0129 - 10447736-10448356,10450418-10450504,10450632-104507... 28 4.4
02_04_0476 + 23248222-23248495,23249558-23249790 28 4.4
01_06_1727 + 39477107-39477395,39477493-39477722 28 4.4
08_02_1179 + 24969044-24969373 27 5.8
04_04_0291 - 24177550-24177731,24179855-24179921 27 5.8
07_03_1777 + 29442542-29442652,29443394-29443455,29443540-294436... 27 7.6
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 27 7.6
01_06_1230 + 35575840-35576020,35576122-35576170,35576365-355764... 27 7.6
>05_01_0438 + 3475017-3475484
Length = 155
Score = 96.3 bits (229), Expect = 1e-20
Identities = 50/85 (58%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXX 181
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV Y+ P
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK 94
Query: 182 XXXXXLAVLRFYKVDE-NGKIHRLR 253
LAVL+FYKVD+ GK+ RLR
Sbjct: 95 HKKVKLAVLQFYKVDDATGKVTRLR 119
Score = 47.2 bits (107), Expect = 7e-06
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +1
Query: 256 ECTGEQCGAGVFMAVMEDRHYCGKCHSTMVF 348
EC CGAG FMA DRHYCGKC T V+
Sbjct: 121 ECPNNDCGAGTFMANHFDRHYCGKCGLTYVY 151
>01_03_0108 - 12628711-12629178
Length = 155
Score = 96.3 bits (229), Expect = 1e-20
Identities = 50/85 (58%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXX 181
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV Y+ P
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHK 94
Query: 182 XXXXXLAVLRFYKVDE-NGKIHRLR 253
LAVL+FYKVD+ GK+ RLR
Sbjct: 95 HKKVKLAVLQFYKVDDATGKVTRLR 119
Score = 47.6 bits (108), Expect = 5e-06
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +1
Query: 256 ECTGEQCGAGVFMAVMEDRHYCGKCHSTMVF 348
EC +CGAG FMA DRHYCGKC T V+
Sbjct: 121 ECPNAECGAGTFMANHFDRHYCGKCGLTYVY 151
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP QQRLI+AGKQL D +T DYNI+ S LHLV
Sbjct: 111 GIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 146
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 415 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 450
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 491 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 526
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 75 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 110
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFA KQLEDGRTL+DYNIQKESTLHLV
Sbjct: 151 GIPPDQQRLIFADKQLEDGRTLADYNIQKESTLHLV 186
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 63 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 98
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP QQRLI+AGKQL D +T DYNI+ S LHLV
Sbjct: 139 GIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 174
>04_04_1238 + 31997671-31998816
Length = 381
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 146
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 222
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 263 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 298
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 339 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 374
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 36 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 71
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 112 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 147
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 188 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 223
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 264 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 299
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 340 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 375
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 416 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 451
>01_06_0031 + 25760878-25761342
Length = 154
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 50.8 bits (116), Expect = 5e-07
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP QQRLI+ GKQL D +T DY I+ S LHLV
Sbjct: 111 GIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLV 146
>01_06_0033 + 25765300-25765758
Length = 152
Score = 74.9 bits (176), Expect = 3e-14
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
G+PP+QQRLIFAGKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 35 GVPPHQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 5 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 100
I + RL++ GKQL D +T+ +Y+I+ S L
Sbjct: 107 IDEREGRLVYGGKQLADDKTVHEYDIEAGSVL 138
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 74.1 bits (174), Expect = 5e-14
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 35 GIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLV 70
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 73.7 bits (173), Expect = 7e-14
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLE+GRTL+DYNIQKESTLHLV
Sbjct: 148 GIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLV 183
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 73.7 bits (173), Expect = 7e-14
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 426 GIPPDQQRLIFAGKQLKDGRTLADYNIQKESTLHLV 461
Score = 70.9 bits (166), Expect = 5e-13
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 106
GIPP+QQRLIFAGKQLEDGRTL+ YNIQKESTLHL
Sbjct: 502 GIPPDQQRLIFAGKQLEDGRTLAGYNIQKESTLHL 536
>05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198
Length = 106
Score = 72.1 bits (169), Expect = 2e-13
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP+QQRLIFAGKQLEDG TL+DYNIQKESTLHLV
Sbjct: 51 GIPPDQQRLIFAGKQLEDGCTLADYNIQKESTLHLV 86
>10_08_0470 - 18151326-18151769
Length = 147
Score = 68.9 bits (161), Expect = 2e-12
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL---VXXXXXXXXXXXXXNYSTPXXX 172
G+PP+QQ LIF G QL+DG TL Y IQ+ESTLHL + Y+TP
Sbjct: 40 GLPPDQQPLIFQGHQLDDGHTLIYYGIQEESTLHLLGRICGGGGGNKKRKKKAYATPKKG 99
Query: 173 XXXXXXXXLAVLRFYKVDE-NGKIHRLR 253
LAVLR Y+VD+ GK+ RLR
Sbjct: 100 KHEHRKEELAVLRHYRVDDVMGKVERLR 127
>08_01_0566 - 5028512-5029150
Length = 212
Score = 56.0 bits (129), Expect = 1e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 106
GIP QQRL+FAG+ LEDGRTL++Y I+KE+ LHL
Sbjct: 35 GIPAAQQRLMFAGRHLEDGRTLAEYGIKKEANLHL 69
>07_03_0447 + 18301421-18301520,18301900-18302060
Length = 86
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 106
GIP + QRL+ AG+QL+D RTL+DY IQ E TL L
Sbjct: 34 GIPADDQRLMHAGRQLDDRRTLADYGIQTEHTLRL 68
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 106
G+PP QQRLIF G+QL+DG T++ I+K S L+L
Sbjct: 104 GLPPCQQRLIFEGRQLDDGDTVASCGIRKHSYLNL 138
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +2
Query: 11 PNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 106
P +QRL+F+G +L D RTL+ Y I++ESTL+L
Sbjct: 215 PCKQRLVFSGMELADDRTLASYGIEEESTLYL 246
>03_01_0224 -
1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 40.3 bits (90), Expect = 8e-04
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 5 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
+P QQRLI+ G+ L+D +TL+ Y ++ + T+H+V
Sbjct: 762 VPAPQQRLIYKGRILKDEQTLASYGVETDHTIHMV 796
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 5 IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
+P QQRLI+ G+ L+D +TL Y ++ + T+H+V
Sbjct: 65 VPAAQQRLIYKGRILKDEQTLESYGVETDHTIHMV 99
>08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137
Length = 174
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/40 (60%), Positives = 29/40 (72%), Gaps = 4/40 (10%)
Frame = +2
Query: 2 GIPPNQQRLI--FAG-KQLEDG-RTLSDYNIQKESTLHLV 109
GI +QQ L+ AG KQL+DG TL+DY+I ESTLHLV
Sbjct: 126 GIRSDQQHLVDVSAGSKQLDDGGSTLADYDIHDESTLHLV 165
>10_08_0796 + 20643667-20643912
Length = 81
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIPP QQ LI+ G+QL D T +++ S LHLV
Sbjct: 38 GIPPPQQTLIYGGRQLADDMTAEMCDLRHGSELHLV 73
>10_08_0361 + 17207657-17207701,17208850-17209773
Length = 322
Score = 36.7 bits (81), Expect = 0.009
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GI N+Q L++AG+QLED + LS +++ + T H++
Sbjct: 121 GILMNEQILMYAGQQLEDNQLLSQCDLRNDQTFHVL 156
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 106
GI ++Q + FAG L++ L+DYNI S++ L
Sbjct: 46 GIDKSKQEMFFAGMHLKNEDKLADYNIMTNSSVDL 80
>08_02_0067 -
11863092-11863104,11863432-11863547,11863610-11863950,
11864978-11865331,11866055-11866150,11866812-11866980,
11867541-11867618,11867745-11867926,11868010-11868094,
11868545-11868648,11869510-11869590,11870123-11870240,
11871299-11871430,11871635-11871788,11871838-11871917
Length = 700
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GI QQRLI G+ L+D LS Y+++ TLHLV
Sbjct: 137 GILSEQQRLICRGRVLKDDELLSAYHVEDGHTLHLV 172
>12_01_1007 -
10208034-10208165,10208376-10208480,10208612-10208673,
10210820-10211456
Length = 311
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GIP QRL FAG +L+D Y+I + ST+ L+
Sbjct: 35 GIPVESQRLFFAGAELDDDGDTERYSILQGSTVLLL 70
>10_02_0200 -
6672743-6673717,6676257-6676634,6677017-6677301,
6677420-6677570,6677696-6677930,6678689-6678764
Length = 699
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GI + Q L++AG+QL+D + LS + + + LH++
Sbjct: 462 GILQDNQMLMYAGRQLDDRQILSHFGLSDDQILHVL 497
>03_06_0392 - 33583375-33583554,33583646-33584126,33584211-33584452
Length = 300
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 20 QRLIFAGKQLEDG-RTLSDYNIQKESTLHL 106
QRL FAG+ L+D RTL+DY ++ +S + L
Sbjct: 42 QRLFFAGRCLDDDHRTLADYGVRHDSVVFL 71
>09_04_0560 -
18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 23 RLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
RL++AG+QL L+D + +STLHL+
Sbjct: 119 RLVYAGRQLAPETALADLRLPPDSTLHLL 147
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 20 QRLIFAGKQLEDGRTLSDYNIQKESTLHL 106
QRL+F G++LED + ++D + + + +HL
Sbjct: 152 QRLVFDGEELEDNQLIADISKKGAAVIHL 180
>05_01_0474 - 3797926-3798609
Length = 227
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 221 VDENGKIH-RLRPSAQASSAAPEC--SWR*WRTVTTAGSVTARWSSKTTTNK*VPSS 382
V E K++ R+ A++AAP S+R + V +AGSV W S+ T K PS+
Sbjct: 12 VKEGSKLYSRMMSKEAAAAAAPLAVPSFRVYYGVASAGSVPFLWESQPGTPKSSPST 68
>06_03_0924 -
25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 8 PPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
P + +L +GK+L+D +L+ N++ S LH+V
Sbjct: 673 PSEKIKLFCSGKELQDDISLAMQNVRPNSILHVV 706
>04_04_0281 + 24121267-24121537,24122567-24122799
Length = 167
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
G+ P +QRL+F GK+ ED L ++ + + L+
Sbjct: 102 GLEPREQRLLFRGKEREDSDHLHMVGVRDKDKVLLL 137
>11_03_0129 -
10447736-10448356,10450418-10450504,10450632-10450742,
10453876-10453935,10454262-10454345,10455200-10455298
Length = 353
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
GI + Q L++AG+ L D + LS+ + + LH++
Sbjct: 187 GIHLDNQILMYAGRHLGDSQILSECGLSDDHILHVL 222
>02_04_0476 + 23248222-23248495,23249558-23249790
Length = 168
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLED 55
G+ P +QRL+F GK+ ED
Sbjct: 103 GLEPREQRLLFRGKERED 120
>01_06_1727 + 39477107-39477395,39477493-39477722
Length = 172
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
G+ P QRL++ GK+ +DG L +Q + + L+
Sbjct: 108 GLWPRDQRLLYKGKERDDGDHLHMVGVQDKDKVLLL 143
>08_02_1179 + 24969044-24969373
Length = 109
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = +1
Query: 46 AGRWTYPLGLQYPEG---IHPPPGVEASW 123
AGRWT P + P+G PPPG W
Sbjct: 24 AGRWTTPGHEERPKGHLFNRPPPGESRKW 52
>04_04_0291 - 24177550-24177731,24179855-24179921
Length = 82
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSD 73
G+ P +QR +F GK+ ED L D
Sbjct: 34 GLEPREQRPLFRGKEREDSDHLKD 57
>07_03_1777 +
29442542-29442652,29443394-29443455,29443540-29443681,
29444043-29444261,29444374-29444440,29444883-29445288,
29445669-29445816,29445903-29446063,29446320-29446419,
29446522-29446596,29446677-29446811,29446921-29447013,
29447475-29447657,29447738-29447842,29448614-29448772,
29449142-29449186,29449296-29449517,29449775-29449881,
29449971-29450027,29450132-29450213,29450291-29450455
Length = 947
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 366 LFVVVFEDHRAVTLPAVVTVL 304
LF+V+FE++R P VV++L
Sbjct: 375 LFIVIFENYREQLAPVVVSIL 395
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 284 PAPHCSPVHSAADGGSY 234
PA H SP HSA+ GSY
Sbjct: 31 PANHYSPYHSASAAGSY 47
>01_06_1230 +
35575840-35576020,35576122-35576170,35576365-35576441,
35576883-35577145,35577241-35577387,35578569-35578766
Length = 304
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 2 GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
G+ P +QRL F GK+ D L ++ + L L+
Sbjct: 114 GVEPERQRLFFRGKEKSDNEFLHTAGVKDGAKLLLL 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,252,824
Number of Sequences: 37544
Number of extensions: 227682
Number of successful extensions: 826
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -