Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00044
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 96 2e-20
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 94 1e-19
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 86 2e-17
09_06_0359 + 22508900-22509439 80 2e-15
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 78 7e-15
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 77 9e-15
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 77 2e-14
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 74 8e-14
02_01_0160 + 1116160-1116678 73 2e-13
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 73 3e-13
10_01_0309 + 3417602-3418147 70 1e-12
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 70 1e-12
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 63 2e-10
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 59 3e-09
06_01_0214 + 1634171-1634173,1634263-1634742 54 1e-07
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 47 1e-05
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 46 3e-05
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 46 3e-05
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 44 8e-05
01_01_0077 - 585670-585787,585921-586687 40 0.002
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 39 0.003
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 38 0.005
02_01_0086 + 613113-613532 36 0.027
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 34 0.083
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 29 2.4
08_02_0053 + 11721658-11721689,11721960-11722710 29 3.1
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 3.1
10_01_0310 + 3425099-3425218 29 4.1
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 95.9 bits (228), Expect = 2e-20
Identities = 47/82 (57%), Positives = 53/82 (64%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 443
G IVIGLFG+ VPKT +NF L +G GYKG FHR+IK+FMIQ RS
Sbjct: 80 GRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRS 139
Query: 444 IYGERFEDENFKLKHYGAGWLS 509
IYGE F+DENF LKH G G LS
Sbjct: 140 IYGECFDDENFTLKHTGPGVLS 161
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +2
Query: 509 MANAGKDTNGSQFFITTVK 565
MANAG DTNGSQFFI TVK
Sbjct: 162 MANAGPDTNGSQFFICTVK 180
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/84 (53%), Positives = 54/84 (64%)
Frame = +3
Query: 258 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 437
N+G +VIGL+G VP+T ENF L +G GYKGS FHRVIK+FMIQ
Sbjct: 98 NVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGG 157
Query: 438 RSIYGERFEDENFKLKHYGAGWLS 509
+SIYG F+DENFKL H G G +S
Sbjct: 158 KSIYGRTFKDENFKLVHTGPGVVS 181
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
+V MANAG +TNGSQFFI TVKTPWLDGRHVVFG+V+EGMD+V+ I
Sbjct: 179 VVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMI 224
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = +1
Query: 172 FIASAKSD--EIPKGPKVTHKVSFDMKIGETI 261
F++SA +D E+ K+T+KV FD+ IG +
Sbjct: 64 FVSSATADPKEVDLQSKITNKVYFDISIGNPV 95
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 86.2 bits (204), Expect = 2e-17
Identities = 45/89 (50%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 422
G +V+GLFGKTVPKT ENF L +G G +KGS FHR+I +FMIQ
Sbjct: 65 GRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQGGDFTLG 124
Query: 423 XXXXXRSIYGERFEDENFKLKHYGAGWLS 509
SIYG +F DENFK+KH G G LS
Sbjct: 125 DGRGGESIYGTKFADENFKIKHTGPGLLS 153
Score = 83.8 bits (198), Expect = 1e-16
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
L+ MANAG+DTNGSQFFITTV T WLDG+HVVFGKVL GMDVV KI
Sbjct: 151 LLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKI 196
>09_06_0359 + 22508900-22509439
Length = 179
Score = 79.8 bits (188), Expect = 2e-15
Identities = 44/89 (49%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 422
G +V+ LF TVPKT ENF L +G G YKGS FHR+I NFM Q
Sbjct: 20 GRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGGDFTRG 79
Query: 423 XXXXXRSIYGERFEDENFKLKHYGAGWLS 509
SIYG+RF DENFKL+H G G LS
Sbjct: 80 NGTGGESIYGDRFADENFKLRHTGPGVLS 108
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/43 (69%), Positives = 37/43 (86%)
Frame = +2
Query: 509 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
MANAG +TNGSQFFI T +T WLDG+HVVFGKV++G VV+K+
Sbjct: 109 MANAGPNTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKM 151
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 77.8 bits (183), Expect = 7e-15
Identities = 44/95 (46%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 422
G IV+GLFG TVPKT ENF + +G G YKG+ FHR+I FMIQ
Sbjct: 54 GRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRIIPGFMIQGGDTVSG 113
Query: 423 XXXXXRSIYGERFEDENFKLKHYGAGWLSWLMQAK 527
SIYG F DENFK+ H G LS AK
Sbjct: 114 NGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAK 148
Score = 74.5 bits (175), Expect = 6e-14
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
L+ MAN KDTNGSQFFITTVK LDG+HVVFGKVL GMDVV KI
Sbjct: 140 LLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKI 185
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 77.4 bits (182), Expect = 9e-15
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = +2
Query: 509 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
MANAG +TNGSQFFITTV TPWLD +H VFG+V++GMDVVQ+I
Sbjct: 584 MANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQQI 626
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 258 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 437
++G I + L+ + PKT ENF + Y FHRVIK FMIQ
Sbjct: 503 SMGDIHLRLYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQ-TGDPLGDGTGG 558
Query: 438 RSIYGERFEDENFK-LKH 488
+SI+G FEDE K L+H
Sbjct: 559 QSIWGREFEDEFHKSLRH 576
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 76.6 bits (180), Expect = 2e-14
Identities = 46/107 (42%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLA---QKPEG--EGYKGSKFHRVIKNFMIQXXXXXXXXX 428
G I + LF VPKT ENF Q + G +GYKG +FHRVIK+FMIQ
Sbjct: 51 GRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDFMIQGGDYMKGDG 110
Query: 429 XXXRSIYGERFEDENFKLKHYGAGWL----SWLMQAKTQMDLNFSSQ 557
SIYG +F+DENF KH G G L S+ + K + D+ SS+
Sbjct: 111 TGCTSIYGTKFDDENFIAKHTGPGLLSMVRSYYIYIKLEQDIEASSK 157
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 491 WCWLVIMANAGKDTNGS-QFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKI 637
+C+ ++ + K +N QFFIT K WLD +HVVFG+VL +GM V+KI
Sbjct: 182 YCFGIVFCSLYKISNIQFQFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKI 232
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 74.1 bits (174), Expect = 8e-14
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
++ MAN+G D+NGSQF+ITT+KT WLDG HVVFG+V++GMD V I
Sbjct: 117 VIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAI 162
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/55 (54%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Frame = +3
Query: 258 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQ 401
+IG IVIGL+G VPKT NF L EG G YKGS+FHR+I FMIQ
Sbjct: 50 HIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQ 104
>02_01_0160 + 1116160-1116678
Length = 172
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
++ MANAG +TNGSQFFI TV WLDG+HVVFG+V+EGMDVV+ I
Sbjct: 104 ILSMANAGPNTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAI 149
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/89 (46%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXX 422
G IV+ L+ K VP+T ENF L +G G YKGS FHRVI FM Q
Sbjct: 18 GRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRG 77
Query: 423 XXXXXRSIYGERFEDENFKLKHYGAGWLS 509
SIYGE+F DE FK KH G LS
Sbjct: 78 NGTGGESIYGEKFADEVFKFKHDSPGILS 106
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
++ MANAG DTNGSQFFITT +TP LDG+HVVFG+V++GM VV+ +
Sbjct: 148 MLSMANAGPDTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSM 193
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/51 (49%), Positives = 28/51 (54%)
Frame = +3
Query: 357 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLS 509
KGS HR++K FM+Q SIYG FEDENF LKH G LS
Sbjct: 100 KGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLS 150
>10_01_0309 + 3417602-3418147
Length = 181
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
+V MANAG +TNGSQFFIT K PWLDGRHV FG+V+ GM V+ I
Sbjct: 114 VVSMANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAI 159
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/93 (35%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = +3
Query: 261 IGTIVIGLFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKFHRVIKNFMIQXXXXXX 419
+G +VI L VP T ENF +L ++ G YKGS FHRV+ FM Q
Sbjct: 24 VGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQGGDITA 83
Query: 420 XXXXXXRSIY---GERFEDENFKLKHYGAGWLS 509
S F DE F +KH G G +S
Sbjct: 84 GNGTGGESALDGAARHFPDEGFAVKHDGPGVVS 116
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/46 (63%), Positives = 40/46 (86%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
++ MAN+G +TNGSQFFITT +TP LDG+HVVFG+V++GM VV+ +
Sbjct: 166 MLSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSV 211
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/51 (52%), Positives = 30/51 (58%)
Frame = +3
Query: 357 KGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLS 509
+GS FHRVIK FM+Q SIYG +FEDENF LKH G LS
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLS 168
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNF 392
G IVI L+ VP+T ENF L +G G K H K+F
Sbjct: 40 GRIVIELYASVVPRTAENFRALCTGEKGVGAVTGK-HLHYKDF 81
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/88 (44%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +3
Query: 270 IVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQXXXXXXXX 425
+V LF P+T ENF L G G YKGS FHRVIK FM Q
Sbjct: 23 MVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFMAQGGDFSNGD 82
Query: 426 XXXXRSIYGERFEDENFKLKHYGAGWLS 509
SIYG FEDENF L+H G LS
Sbjct: 83 GSGGESIYGGTFEDENFVLRHDERGLLS 110
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
L+ MANAG +TNGSQFFIT LD + VFGK++ G DV+++I
Sbjct: 108 LLSMANAGPNTNGSQFFITFKHNSRLDRKSTVFGKLILGNDVLKRI 153
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
++ MANAG +TNGSQFFIT LDG+H +FG+V +GM++V+++
Sbjct: 95 ILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRVSKGMEIVKRL 140
Score = 54.8 bits (126), Expect = 5e-08
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 437
++G I ++ K PKT NF +L+++ Y FHR+IK+F++Q
Sbjct: 17 SMGAFTIEMYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQ-GGDPTGTGRGG 72
Query: 438 RSIYGERFEDE-NFKLKHYGAGWLS 509
SIYG +FEDE +LKH GAG LS
Sbjct: 73 ESIYGAKFEDEIRPELKHTGAGILS 97
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +2
Query: 509 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVV 628
MAN+G +TNGSQFFIT K P L+G + VF KV+ G +V+
Sbjct: 89 MANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIHGFEVL 128
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/85 (37%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 437
N+G I +F P+T ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEVFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQ-GGDPTGTGKGG 63
Query: 438 RSIYGERFEDE-NFKLKHYGAGWLS 509
SI+G++F DE LKH G +S
Sbjct: 64 TSIWGKKFADEFRESLKHNARGVMS 88
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 503 VIMANAGKDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQKI 637
+ MA+AG++ N SQF+IT +LD +H VFG V EG D + KI
Sbjct: 124 IAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKI 169
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 503 VIMANAGKDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQKI 637
+ MA+AG++ N SQF+IT +LD +H VFG V EG D + KI
Sbjct: 94 IAMASAGENCNASQFYITLRDDVDYLDDKHTVFGMVAEGFDTLTKI 139
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 258 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 401
++G I + L P TT+NF +L + + Y G FH+V K+F+ Q
Sbjct: 8 SVGDIEVDLHTDMCPLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQ 52
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 500 LVIMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 619
+V MAN+G TNGSQFFI P L+ +H VFG V+ G+
Sbjct: 430 VVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGL 469
Score = 45.2 bits (102), Expect = 4e-05
Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 443
G + + L P+T ENF E Y G FHR IKNFMIQ S
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC---ENGYYNGLIFHRSIKNFMIQ-GGDPTGTGSGGES 409
Query: 444 IYGERFEDE-NFKLKHYGAGWLS 509
I+G+ F+DE N KL H G G +S
Sbjct: 410 IWGKPFKDELNSKLIHSGRGVVS 432
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 44.4 bits (100), Expect = 8e-05
Identities = 29/69 (42%), Positives = 35/69 (50%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 443
G + I L+ K PK NF QL EG Y G+ FHRVIK+F++Q S
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQ-GGDPTGSGTGGES 77
Query: 444 IYGERFEDE 470
IYG F DE
Sbjct: 78 IYGAPFADE 86
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = +2
Query: 500 LVIMANAGKD-TNGSQFFITTVKTPWLDGRHVVFGKV 607
LV ANAG +NGSQFFI+ + WLD ++ +FGKV
Sbjct: 98 LVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV 134
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +2
Query: 533 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
NG++F ITT P LD +V G+V++GMDV+ KI
Sbjct: 206 NGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 8/52 (15%)
Frame = +3
Query: 270 IVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQ 401
I LF VPKTTENF L G G +KG+ HR++K FM Q
Sbjct: 24 ITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHRILKGFMAQ 75
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 584 RHVVFGKVLEGMDVVQKI 637
+HVVFGKV+ GM +++K+
Sbjct: 94 KHVVFGKVVTGMPLLKKL 111
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 527 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
+ G FITT P L+ + VVFG+V+ G D+VQ+I
Sbjct: 186 NNKGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEI 222
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 401
G+I I ++ + F L + +KG F VIKNF+IQ
Sbjct: 103 GSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQ 145
>02_01_0086 + 613113-613532
Length = 139
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 509 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
+ N + N SQFF + PW DG +VVFG ++ G ++ I
Sbjct: 75 LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAI 114
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 527 DTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 637
++ GS F I P LDG++ VFG++ +G D ++K+
Sbjct: 173 NSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKL 209
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQ 401
G I G F PKT E+ ++L + Y + F RV K F+ Q
Sbjct: 84 GDIEFGFFPHVAPKTVEHIYKLVRL---GCYNTNHFFRVDKGFVAQ 126
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -3
Query: 627 TTSIPSKTLPKTTCLPSNQGVLTVVMKN*DPFVSLPALAMITN 499
T ++P T+PK+ L ++ L V M+N SL ALA+I N
Sbjct: 2903 TAALPLSTIPKS--LNNSHFALEVTMRNGKKHASLRALAIIAN 2943
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +2
Query: 542 QFFITTVKTPW--LDGRHVVFGKVLEG 616
+F +TT P LDG+++VFG VLEG
Sbjct: 234 EFLVTTGPGPCPELDGQNIVFGTVLEG 260
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 473 VFIFKTFTIYTAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 330
V + TI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 132 VVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
>10_01_0310 + 3425099-3425218
Length = 39
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 264 GTIVIGLFGKTVPKTTENF 320
G++VI F VPKTTENF
Sbjct: 8 GSVVIEQFADKVPKTTENF 26
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,570,946
Number of Sequences: 37544
Number of extensions: 322549
Number of successful extensions: 624
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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