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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30064
         (604 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0183 - 27268190-27268281,27268454-27268478,27268568-272686...   143   8e-35
03_02_0896 - 12233706-12233801,12234005-12234181,12234741-122348...    60   2e-09
01_01_0217 + 1848970-1849251,1849419-1849566,1849638-1849789,185...    36   0.019
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729...    33   0.13 
09_04_0738 - 19828852-19828892,19830033-19830156,19830515-198307...    33   0.17 
09_04_0225 - 15855544-15855727,15855796-15856406                       33   0.23 
12_02_1111 - 26157796-26160330                                         32   0.40 
01_06_0223 + 27669759-27670286                                         31   0.70 
10_08_0548 - 18685114-18685230,18685615-18685724,18685779-186858...    30   1.6  
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434...    30   1.6  
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683...    29   2.1  
01_06_0996 + 33667663-33667900,33668019-33668091,33668785-336688...    29   2.1  
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662...    29   2.8  
12_01_0206 + 1555278-1555448,1555710-1555772,1556236-1556307,155...    29   2.8  
11_01_0202 + 1606317-1606487,1606743-1606805,1607045-1607116,160...    29   2.8  
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467           29   2.8  
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055     29   2.8  
01_06_0994 + 33653055-33653144,33653219-33653310,33653483-336535...    29   2.8  
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713     29   2.8  
06_03_1180 + 28218386-28218649,28218725-28219202,28219309-282196...    29   3.7  
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988...    29   3.7  
09_06_0121 + 20975132-20975755,20976834-20976977,20977333-209774...    28   5.0  
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630...    28   5.0  
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059...    28   5.0  
12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076...    28   6.5  
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591     27   8.7  
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250...    27   8.7  
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785...    27   8.7  

>01_06_0183 -
           27268190-27268281,27268454-27268478,27268568-27268621,
           27268688-27268747,27269166-27269300,27270106-27270213,
           27270330-27270458,27270845-27270905,27271081-27271112,
           27271161-27271289
          Length = 274

 Score =  143 bits (347), Expect = 8e-35
 Identities = 80/158 (50%), Positives = 98/158 (62%), Gaps = 6/158 (3%)
 Frame = +2

Query: 134 GKLKSLVPGTKSVIGKDSGAQADIHLLDGDLVRFGSHELLAAATPGHTNGCLTYICHEQS 313
           G +K+ +PG KSVI K S A+AD  +  GD + FG+  L   +TPGHT GC+TY+  E  
Sbjct: 114 GLIKTKLPGVKSVIAKVSKAKADHFIEHGDKIYFGNLFLEVRSTPGHTAGCVTYVTGEGD 173

Query: 314 ------LAFTGDTLLIRGCGRTDFQEGNSETLYKSVHNRIFTLPDEYVLYPAHDYRGQTA 475
                 +AFTGD LLIR CGRTDFQ              IFTLP + +LYP HDY+G T 
Sbjct: 174 DQPSPRMAFTGDALLIRACGRTDFQ--------------IFTLPKDTLLYPGHDYKGFTV 219

Query: 476 TSVAEEKKYNPRLTKSLAEFVEIMDNLNLPYPKMINKA 589
           ++V EE  YN RLTK    F +IMDNLNL YPKMI+ A
Sbjct: 220 STVEEEVAYNARLTKDKETFKKIMDNLNLAYPKMIDVA 257


>03_02_0896 -
           12233706-12233801,12234005-12234181,12234741-12234854,
           12234928-12235006,12235372-12235533,12235957-12236079,
           12236139-12236218
          Length = 276

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
 Frame = +2

Query: 137 KLKSLVPGTKSVIGK-DSGAQADIHLLDGDLVRFGSH-ELLAAATPGHTNGCLTYIC--- 301
           K+   VPG K   G  D+       + +G  +  G   E+L   TP HT G ++Y     
Sbjct: 76  KMAQSVPGIKVYGGSLDNVKGCTDQVENGTKLSLGKDIEILCLHTPCHTKGHISYYVTSK 135

Query: 302 -HEQSLAFTGDTLLIRGCGRTDFQEGNSETLYKSVHNRIFTLPDEYVLYPAHDYRGQTAT 478
             E    FTGDTL I GCGR  F EG +E +Y+S+   + +LP    +Y  H+Y  +   
Sbjct: 136 EEEDPAVFTGDTLFIAGCGR--FFEGTAEQMYQSLCVTLGSLPKPTQVYCGHEYTVKNLK 193

Query: 479 SVAEEKKYNPRLTKSLAEFVEIMDNLNLP 565
            +   +  N ++ + L E+ +     N P
Sbjct: 194 FILTVEPDNEKVKQKL-EWAQKQREANQP 221


>01_01_0217 +
           1848970-1849251,1849419-1849566,1849638-1849789,
           1850146-1850328,1850690-1850765,1850956-1851033,
           1851584-1851669,1852680-1852753,1852920-1852965,
           1853211-1853320,1853600-1853774,1854501-1854749
          Length = 552

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +2

Query: 161 TKSVIGKDSGAQADIHLLDGDLVRFGSHELLAAATPGHTNGCLTYICHEQSLAFTGDTLL 340
           T S IGK + +     +  G+ +  G  +L     PGHT+G +  +    +    GD  +
Sbjct: 300 TMSRIGKGNWSIGYTAVAGGENICIGDQQLQVVFAPGHTDGHMGVLHVNTNALIVGDHCV 359

Query: 341 IRGCGRTDFQE-GNSETLYKSVHNRIFTLPDEYVLYPAH 454
            +G    D +  GN +  +++ +N +   P  +VL P H
Sbjct: 360 GQGSATLDNRAGGNMKDYFQTTYNFLDMSP--HVLIPMH 396


>03_02_0308 -
           7297228-7298008,7298495-7298576,7298612-7298669,
           7298723-7298835,7298924-7299034,7299480-7299597,
           7299706-7299809,7300570-7300665,7301806-7302307
          Length = 654

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -2

Query: 276 VWPGVAAARSSWLPNRTRSPSSR--WISAWAPESLPMTLLVPGTSDFNFPSAGY 121
           V P   AA +   P+    P+S   W++  AP S P  L VPGT  F  P +G+
Sbjct: 500 VAPAPVAAAAMPFPSPVPLPNSTTAWMAEAAPRSAPQRLPVPGTGVFLPPGSGH 553


>09_04_0738 -
           19828852-19828892,19830033-19830156,19830515-19830718,
           19831505-19831690,19832098-19832172
          Length = 209

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 200 DIHLLDGDLVRFGSHELLAAATPGHTNGCL 289
           DI L +GD   F  H++L   TPGHT+  L
Sbjct: 170 DITLSEGDTWMFAGHQVLVMETPGHTSDVL 199


>09_04_0225 - 15855544-15855727,15855796-15856406
          Length = 264

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +2

Query: 326 GDTLLIRGCGRTDFQEGNSETLYKSVHNRIFTLPDEYVLYPAHDYRGQTATSVAEEKKYN 505
           GD L++ GC   +  +G +     SV       P +YV+  A D       ++A+E +  
Sbjct: 104 GDILVLDGCSTENMNDGKTHAYLSSVPRLFAPCPYDYVM-KADDDTYLRVAALADELRGK 162

Query: 506 PRLTKSLA 529
           PR T + A
Sbjct: 163 PRRTSTSA 170


>12_02_1111 - 26157796-26160330
          Length = 844

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -2

Query: 390 RVSELPSWKSVRPQPRIKRVSPVNA--NDCS*HM*VKHPLVWPGVAAARSSWLPNRTRSP 217
           R+S   SW++  P+P ++ +               ++H ++ P ++AA  SW P R + P
Sbjct: 493 RISGTNSWEARDPEPMLRFLESWERLLPPIVLQSILEH-VIMPKLSAAVDSWDPRREKVP 551

Query: 216 SSRWISAWAP 187
              W+  W P
Sbjct: 552 IHVWVHPWLP 561


>01_06_0223 + 27669759-27670286
          Length = 175

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +3

Query: 75  CFFFNFS--EHTHACRPYNRHWGS*SHSYRVLKAS*ARIREPKPISTCSTVTWCGSGATN 248
           C+F N++  +  H CR   R+W +     RV  AS  R R P+P +  S      S +  
Sbjct: 97  CYFNNYNVRQPRHLCRSCRRYWTAGGALRRVASASPGR-RRPRPSAARSAAAAAASASAA 155

Query: 249 S 251
           S
Sbjct: 156 S 156


>10_08_0548 -
           18685114-18685230,18685615-18685724,18685779-18685802,
           18686135-18686213,18686346-18686588,18686659-18686823,
           18686960-18687037,18687185-18687231,18687319-18687379,
           18687667-18687723,18688164-18688247,18689292-18689357,
           18689447-18689574,18689693-18689885
          Length = 483

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 7/124 (5%)
 Frame = -1

Query: 451 RGIQHVLVGQSEYSIVDRFVEGLRVTLLEVGAAATPDQEGVTSERQ*LFVTYV----SQA 284
           +G  ++L  +   ++ D+F+EGL    L+  A   PD E V S+     + Y+    S  
Sbjct: 282 QGHFNILHKKHSVTLPDQFIEGLSSACLQGRAQIVPDPE-VLSKDSSSLIFYLDGAHSPE 340

Query: 283 SISVARSRSSEEFVAPEPHQVTVEQVDIGLGSR-ILAYDAFSTRYE*LQLPQCRL--YGR 113
           S+ +     S      E     ++Q+ IG  SR IL ++  S R     LP C L    +
Sbjct: 341 SMEICAKWFSCVTRKDEQQPGPLDQLHIGTNSRKILLFNCMSVRDPQRLLP-CLLATCAQ 399

Query: 112 HACV 101
           +ACV
Sbjct: 400 NACV 403


>05_05_0016 -
           21542300-21542886,21542956-21543286,21543310-21543419,
           21543526-21544069,21544190-21544345
          Length = 575

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/51 (31%), Positives = 20/51 (39%)
 Frame = -2

Query: 288 KHPLVWPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           KH   WP V A R+ W         ++W S W    +P  LL      F F
Sbjct: 114 KHGCPWPAVPAIRTKW--------GNKWHSKWFYHQIPADLLANKECPFTF 156


>04_04_0664 -
           27066253-27067155,27067242-27067508,27067707-27068368,
           27068479-27069047,27070011-27070108
          Length = 832

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/51 (31%), Positives = 19/51 (37%)
 Frame = -2

Query: 288 KHPLVWPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           KH   WP V A R  W         ++W S W    +P  LL      F F
Sbjct: 103 KHGCPWPAVLAIRIKW--------GNKWQSRWFYHQIPANLLADKECPFTF 145


>01_06_0996 +
           33667663-33667900,33668019-33668091,33668785-33668841,
           33668970-33669067,33669482-33669637,33669744-33670366,
           33670484-33670560,33671551-33671805,33671950-33672067,
           33672174-33672345,33672434-33672975
          Length = 802

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -1

Query: 475 RSLPSVIVRGIQHVLVGQSEYSI-VDRFVEGLRVTLLEVGAAATPD 341
           RS P+VI  G +  +VGQS YS   +  + G R  ++ VG   T D
Sbjct: 400 RSFPTVITLGDKRQIVGQSLYSQGKNSSLSGFRRLVVGVGGRCTED 445


>12_02_0035 -
           12563503-12564405,12564494-12565611,12565709-12566239,
           12566337-12567153
          Length = 1122

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 273 WPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           WP V+A R+ W         ++W S W    +P++LL      F+F
Sbjct: 158 WPAVSAIRAKW--------GNKWQSKWFYHQIPLSLLNDKDCPFSF 195


>12_01_0206 +
           1555278-1555448,1555710-1555772,1556236-1556307,
           1556430-1556537,1556644-1556724,1556861-1556914,
           1557020-1557145,1557228-1557317,1557603-1557725,
           1557831-1557938,1558287-1558400,1558530-1558586,
           1558667-1558741,1558915-1558989
          Length = 438

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 326 GDTLLIRGCGRTDFQEGNSETLYKSVHNRIFTLPDEYVLYPA 451
           G  L +   G   F++ N  TLYK + N  FT P  +  +PA
Sbjct: 201 GVILFVLLAGYLPFEDSNLMTLYKKISNAEFTFP-PWTSFPA 241


>11_01_0202 +
           1606317-1606487,1606743-1606805,1607045-1607116,
           1607244-1607351,1607497-1607538,1607965-1608018,
           1608130-1608255,1608338-1608427,1608735-1608857,
           1608963-1609070,1609412-1609573,1609655-1609711,
           1609792-1609884
          Length = 422

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 326 GDTLLIRGCGRTDFQEGNSETLYKSVHNRIFTLPDEYVLYPA 451
           G  L +   G   F++ N  TLYK + N  FT P  +  +PA
Sbjct: 188 GVILFVLLAGYLPFEDSNLMTLYKKISNAEFTFP-PWTSFPA 228


>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
          Length = 945

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 273 WPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           WP V+A R+ W         ++W S W    +P++LL      F+F
Sbjct: 158 WPAVSAIRAKW--------GNKWQSKWFYHQIPLSLLNDKDCPFSF 195


>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
          Length = 963

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 273 WPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           WP V+A R+ W         ++W S W    +P++LL      F+F
Sbjct: 158 WPAVSAIRAKW--------GNKWQSKWFYHQIPLSLLNDKDCPFSF 195


>01_06_0994 +
           33653055-33653144,33653219-33653310,33653483-33653580,
           33653758-33653913,33654009-33654628,33654721-33654794,
           33654905-33655156,33655250-33655367,33655468-33655639,
           33655729-33656270
          Length = 737

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -1

Query: 475 RSLPSVIVRGIQHVLVGQSEYSIVDRFVEGLRVTLLEVGAAATPD 341
           RS P+VI  G +  +VGQS Y        G    LL  G   T D
Sbjct: 337 RSFPTVITLGDKRQIVGQSMYYYEGNNSSGSSFRLLAYGGLCTKD 381


>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
          Length = 946

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 273 WPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           WP V+A R+ W         ++W S W    +P++LL      F+F
Sbjct: 158 WPAVSAIRAKW--------GNKWQSKWFYHQIPLSLLNDKDCPFSF 195


>06_03_1180 +
           28218386-28218649,28218725-28219202,28219309-28219697,
           28219785-28220426,28220466-28221368
          Length = 891

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 273 WPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           WP V+A R+ W         ++W S W    +P++LL      F+F
Sbjct: 133 WPAVSAIRAKW--------GNKWQSKWFYHQIPVSLLNDKDCPFSF 170


>05_05_0156 +
           22792783-22793410,22797153-22797227,22797644-22798879,
           22798947-22799155,22799240-22800209,22800395-22800465
          Length = 1062

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -2

Query: 405 WTDL*RVSELPSWKS---VRPQPRIKRVSPVNAN 313
           WT   R+   PSWK    V  +PRI  + P+NAN
Sbjct: 125 WTLEHRMEITPSWKGELKVPEKPRIGAIDPLNAN 158


>09_06_0121 +
           20975132-20975755,20976834-20976977,20977333-20977457,
           20978090-20978194,20978755-20978989
          Length = 410

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 291 VKHPLVWPGVAAARSSWLPNRTRSPSS 211
           +  PL WP +      WLP+ +RSP S
Sbjct: 34  ISQPLEWPSLTV---QWLPSHSRSPGS 57


>03_06_0341 -
           33261210-33261327,33261411-33262057,33262950-33263061,
           33263313-33264097,33264797-33264867,33266323-33266635
          Length = 681

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/63 (22%), Positives = 27/63 (42%)
 Frame = +2

Query: 356 RTDFQEGNSETLYKSVHNRIFTLPDEYVLYPAHDYRGQTATSVAEEKKYNPRLTKSLAEF 535
           RT F      T+    HNR   LPD +    A  +R       + +K    R ++ ++ +
Sbjct: 132 RTSFSPSRENTMLSQRHNRYEELPDTWYKQYAEKFRTWHGKFRSGDKDIPKRTSEGMSNY 191

Query: 536 VEI 544
           +++
Sbjct: 192 LKV 194


>02_05_0740 -
           31404004-31404180,31404365-31405261,31405351-31405978,
           31405997-31406468,31406575-31407052
          Length = 883

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -2

Query: 273 WPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           WP V+A R  W         ++W S W    +P++LL      F+F
Sbjct: 45  WPAVSAIREKW--------GNKWQSKWFYHQIPVSLLNDKDCPFSF 82


>12_02_0781 +
           23105554-23106855,23107191-23107511,23107581-23107667,
           23107907-23108302,23108327-23108500,23108600-23108764,
           23108857-23109151,23109319-23109446,23109681-23109986,
           23110531-23110591,23110676-23110915,23111251-23111372
          Length = 1198

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 456 SCAGYSTYSSGKVNILLWTDL*RVSELPSW 367
           SC+  + +SSG++   L  D  R+ E P W
Sbjct: 148 SCSASTEHSSGEIMNYLMVDTYRIGEFPFW 177


>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
          Length = 573

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -1

Query: 493 LFGDRCRSLPSVIVRGIQHVLVGQSEYSIVDRFVEGLRVTLLEVGAAATPDQE 335
           L G+RC  L   + R ++H+ +G  E+ +V   +E     + +V  A T D E
Sbjct: 100 LIGNRCEELCCEVQRDLEHLNLGIVEHGLV-AALEAQPTLVEQVRIAQTSDPE 151


>02_01_0348 -
           2506007-2506909,2507003-2508120,2508230-2508883,
           2508920-2509046
          Length = 933

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 273 WPGVAAARSSWLPNRTRSPSSRWISAWAPESLPMTLLVPGTSDFNF 136
           WP ++A R+ W         ++W S W    +P++LL      F+F
Sbjct: 146 WPAMSAIRAKW--------GNKWQSKWFYHQIPVSLLNDKDCPFSF 183


>01_07_0084 + 40976976-40977164,40978174-40978201,40978445-40978575,
            40978941-40979434,40979516-40979609,40979686-40979779,
            40980342-40980444,40980550-40980601,40980716-40980756,
            40980881-40980960,40981490-40981936,40982378-40982554,
            40983205-40983803,40983886-40985040
          Length = 1227

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 84   FNFSEHTHACRPYNRHWGS*SHSYRVLKAS*AR 182
            +N+ + ++   PY+R W S   SY  + A  +R
Sbjct: 1118 WNYGQQSYNPEPYSRQWSSGQQSYNTVTAEPSR 1150


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,659,041
Number of Sequences: 37544
Number of extensions: 388874
Number of successful extensions: 1196
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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