Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30050
(735 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0487 + 24838620-24838967,24840526-24840747,24840819-248411... 36 0.033
07_03_0899 + 22421038-22422642 32 0.54
01_06_0958 - 33357689-33357997,33358135-33358284,33358371-333585... 32 0.54
10_06_0088 - 10538037-10539463,10539696-10539789 31 0.95
10_07_0172 + 13804803-13805293,13805423-13805537,13805766-138058... 31 1.3
07_03_0898 - 22403337-22404950 31 1.3
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 31 1.3
01_06_0231 + 27727110-27727206,27727315-27727447,27727491-277275... 30 1.7
04_04_1335 - 32730516-32730570,32730655-32731154,32731235-327314... 30 2.2
01_05_0788 + 25223373-25223405,25224285-25224373,25224496-252246... 30 2.2
10_08_0054 + 14501357-14502478 29 2.9
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536... 29 2.9
07_03_1391 + 26234647-26235026,26235112-26235226,26235345-262354... 29 2.9
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 29 2.9
06_03_1501 + 30612643-30613310,30613396-30613501,30613732-306139... 29 2.9
11_06_0335 + 22441240-22441548,22441958-22442028,22442321-224423... 29 3.8
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112... 29 3.8
05_03_0182 + 9332280-9332363,9334212-9334286,9334390-9334437,933... 29 3.8
03_01_0469 - 3613062-3613745,3613952-3614512,3614600-3614690,361... 29 3.8
12_02_1255 + 27360958-27362682 29 5.1
05_01_0498 + 4152729-4152820,4153316-4153425,4153840-4153877,415... 29 5.1
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 29 5.1
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 28 6.7
06_03_0741 - 24016204-24016298,24016408-24016525,24016805-240169... 28 6.7
05_07_0260 - 28739035-28739085,28739316-28739596,28740545-287405... 28 6.7
04_04_1601 + 34707975-34708209,34708598-34709970 28 6.7
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 28 6.7
01_07_0304 - 42628086-42628104,42628828-42630263 28 6.7
01_03_0126 + 12741397-12743022 28 6.7
09_04_0290 - 16429495-16429559,16430040-16430316,16430410-164305... 28 8.8
07_03_0896 + 22373348-22374946 28 8.8
04_04_1113 - 30986757-30986780,30986781-30987273,30987437-309879... 28 8.8
>03_05_0487 +
24838620-24838967,24840526-24840747,24840819-24841109,
24841316-24841513,24841641-24841705,24841788-24841874,
24841988-24842108,24842200-24842244,24842321-24842458,
24842571-24842643,24842723-24842799,24842882-24842989,
24843108-24843224,24843524-24843679,24843780-24843881,
24844036-24844161,24844237-24844314,24844390-24844485,
24844592-24844707,24844781-24844850,24844930-24844983,
24845062-24845205,24845297-24845596,24845780-24846202,
24846316-24846429
Length = 1222
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2
Query: 665 DYEQGGGSPTVGHERCSHRGNTTDEHYSTVKGLSSDLVDEEADGEVRDRE 516
+YE+G GH H G E Y V G ++ DEEADG+ D E
Sbjct: 5 EYEEGMEMEMGGHHHPHHGGGYGAEEYGAVGG--EEMEDEEADGDAPDEE 52
>07_03_0899 + 22421038-22422642
Length = 534
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 8 RRAFVWCWCAPGLAAALILLFL-PESPKFLLANKGPEAALPVLATMYEWNYGSGL 169
R +VW P L A++L FL ESP++LL + A+ L + N G G+
Sbjct: 244 RNMYVWT-SLPSLCYAVLLYFLVQESPRWLLVRGRKQEAIAALRQIASLNGGEGI 297
>01_06_0958 -
33357689-33357997,33358135-33358284,33358371-33358511,
33359807-33360592
Length = 461
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 606 ATVGAAFVPHGGAATALLIVSLCSGCAASILAAIVVDV---FPXCL 734
AT ++F+ GGAA+ +L LC+GC A I D+ F CL
Sbjct: 104 ATAYSSFMVTGGAASNVLYNLLCTGCGRRAAAVIDYDIALLFQPCL 149
>10_06_0088 - 10538037-10539463,10539696-10539789
Length = 506
Score = 31.1 bits (67), Expect = 0.95
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 11 RAFVWCWCAPGLAAALILLFLPESPKFLLANKGPEAALPVL 133
RA + P A AL +L +PESP++L+ E AL VL
Sbjct: 174 RAMLGLGALPSAALALGVLAMPESPRWLVVQGRAEEALSVL 214
>10_07_0172 +
13804803-13805293,13805423-13805537,13805766-13805831,
13805921-13806009,13806103-13806193,13806312-13806458,
13806575-13806667,13806745-13806846,13806957-13807541,
13808523-13808813,13808866-13808937
Length = 713
Score = 30.7 bits (66), Expect = 1.3
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +1
Query: 163 WIKISGGKDIDVKFRCPKSWRIRRSC 240
W+ + GKD++++ CP+ W++ + C
Sbjct: 254 WLDVGEGKDVNLEEHCPR-WKLHKQC 278
>07_03_0898 - 22403337-22404950
Length = 537
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 8 RRAFVWCWCAPGLAAALILLFL-PESPKFLLANKGPEAALPVLATMYEWNYGSGL 169
R +VW P L A++L FL ESP++LL + A+ L + N G G+
Sbjct: 236 RTMYVWT-SLPSLCYAVLLYFLVQESPRWLLVRGRNQEAIEALRQIASLNGGEGV 289
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 38 PGLAAALILLFLPESPKFLLANKGPEAALPVLATMYE 148
P + +++LFLPESP++L A+ VL +Y+
Sbjct: 200 PAILQFVLMLFLPESPRWLFWKDEKAKAISVLEKIYD 236
>01_06_0231 +
27727110-27727206,27727315-27727447,27727491-27727553,
27729069-27729140,27729640-27729783,27729868-27729990,
27730102-27730157,27730249-27730635,27731176-27731366,
27731498-27731630,27731715-27731869,27732188-27732379,
27732490-27732750
Length = 668
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/56 (26%), Positives = 22/56 (39%)
Frame = +2
Query: 530 PRHRLLHQQDRKKDPLLWNNVRLWCCHGGSSVRAPRWGCHRPAHSLAVLRMCGLDI 697
P + +R DP WN VR C G + W C P S ++ C ++
Sbjct: 47 PHGAMAGWSERDGDPCSWNGVR--CVDGRVVILDSDWKCSLPIRSRIIVAKCSRNL 100
>04_04_1335 -
32730516-32730570,32730655-32731154,32731235-32731416,
32732673-32732779,32733364-32733395,32733499-32733542,
32733816-32733977,32734356-32734755
Length = 493
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 624 FVPHGGAATALLIVSLCSGCAASILAAIVV 713
FVP GG + +I + SGC S+LA+ VV
Sbjct: 286 FVPRGGDSGVFVIPASSSGCLPSLLASPVV 315
>01_05_0788 +
25223373-25223405,25224285-25224373,25224496-25224624,
25224710-25224766,25224844-25224916,25225509-25225667,
25226755-25226904,25227013-25227268,25227358-25227479,
25227531-25227599,25227653-25227739,25227842-25227930,
25228168-25228224,25229162-25229258,25229348-25229506
Length = 541
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 14 AFVWCWCAPGLAAALILLFLPESPKFLLANKGPEAALPVLATMYEWNYGSGL 169
A + W PG+ LL+ P + FLL K PE + L ++EW++ SGL
Sbjct: 293 AVILIWEIPGVFE---LLWSPFT--FLLGYKDPEPSKANLPLLHEWHFRSGL 339
>10_08_0054 + 14501357-14502478
Length = 373
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 31 VRARSS-GCLDP-AVPTRKPKISAGQQGPGSGITGFGYYVRVELWIWIKISGGKDIDVKF 204
VRAR++ G LD P K+ AG G TGFGY+ + + K+ +D
Sbjct: 96 VRARATFGLLDRLGKPMMSCKLDAGMHGFTVSETGFGYHEFIGAEVLEKLGYVRDDSFTI 155
Query: 205 RC 210
RC
Sbjct: 156 RC 157
>09_06_0176 + 21351884-21352693,21352821-21352976,21353425-21353613,
21354741-21356354,21356446-21356553,21356649-21357509,
21357586-21357632,21358591-21358697,21359512-21359630,
21359706-21359915,21360412-21360693,21360820-21360952,
21361256-21361413,21362564-21362647,21362949-21363035
Length = 1654
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 572 GLSSDLVDEEADGEVRDREHGAMAIE 495
G S+D++D+++D V+D ++GA E
Sbjct: 1252 GTSTDVIDKQSDAHVKDEDYGATVNE 1277
>07_03_1391 +
26234647-26235026,26235112-26235226,26235345-26235410,
26235519-26235607,26235717-26235807,26235917-26236063,
26236160-26236252,26236373-26236474,26236581-26237255
Length = 585
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 163 WIKISGGKDIDVKFRCPKSWRIRRSC 240
W+ + GK+I+++ RCP+ W++ C
Sbjct: 217 WLDVGEGKEINLEDRCPR-WKLLSQC 241
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 38 PGLAAALILLFLPESPKFLLANKGPEAALPVLATMY 145
P + ++LFLPESP++L E A +L +Y
Sbjct: 195 PAVVQFFLMLFLPESPRWLYRKGREEEAEAILRKIY 230
>06_03_1501 +
30612643-30613310,30613396-30613501,30613732-30613934,
30614211-30614502
Length = 422
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 35 APGLAAALILLFLPESPKFLLANKGPEAALPVLATMYEWNYGSGLKY 175
AP +A L FLP + + K P A+LPV+ T+Y +Y KY
Sbjct: 56 APSASAMSRLHFLPRNLQTSHPAKAPPASLPVIHTVY--HYAKFAKY 100
>11_06_0335 +
22441240-22441548,22441958-22442028,22442321-22442381,
22443252-22443326,22443431-22443478,22443565-22443666,
22443971-22444032,22444187-22444284,22444361-22444470
Length = 311
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 543 FFINKIGRKTLYCGIMFVCGVA 608
FF+ K+G KTL C I+F G+A
Sbjct: 226 FFVTKLGIKTLPCVILFKKGIA 247
>09_03_0130 -
12609417-12610462,12610786-12611040,12611139-12611253,
12611376-12611428,12611854-12612114,12612252-12612302,
12612412-12612660,12612779-12613007,12613292-12613666
Length = 877
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 131 LATMYEWNYGSGLKYPVGRISTSNLD-AQRVGGFVGAVK 244
L MY WNYGS LKY +LD +G +G V+
Sbjct: 596 LCIMYTWNYGSVLKYQSEMRGKISLDFILDLGSTLGTVR 634
>05_03_0182 +
9332280-9332363,9334212-9334286,9334390-9334437,
9334513-9334596,9334905-9334966,9335109-9335206,
9335281-9335390
Length = 186
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 543 FFINKIGRKTLYCGIMFVCGVA 608
FF+ K+G KTL C I+F G+A
Sbjct: 101 FFVTKLGIKTLPCVILFKKGIA 122
>03_01_0469 -
3613062-3613745,3613952-3614512,3614600-3614690,
3614782-3614870,3614962-3615027,3615309-3615423,
3615521-3615966
Length = 683
Score = 29.1 bits (62), Expect = 3.8
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +1
Query: 163 WIKISGGKDIDVKFRCPKSWRIRRSC 240
W+ + GKD+ ++ CP+ W++ + C
Sbjct: 239 WLDVGEGKDVSMEDHCPR-WKLLQQC 263
>12_02_1255 + 27360958-27362682
Length = 574
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 558 IGRKTLYCGIMFVCGVATVGAAFVPHGGAATALLIVSLCSGCAASILAAIVVDVF 722
I R + G++ + + AF G A +++ C G A ++ AI+ +VF
Sbjct: 404 ISRPVVVTGVLLLTVAGHLLVAFGVPGSLYAASVLIGFCFGAAYPMILAIISEVF 458
>05_01_0498 +
4152729-4152820,4153316-4153425,4153840-4153877,
4154335-4154433,4154461-4157475
Length = 1117
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 137 TMYEWNYGSGLKYPVGRISTSNLDAQRVGGFVGAVKD-IAQCSSHPSLDVFSSHIHLCLP 313
++Y G+ +GR+ L GA+ D + CSS +D F +H H +P
Sbjct: 552 SLYHNGLTGGIPPEIGRLQRLKLLFLYENEMTGAIPDEMTNCSSLEEVDFFGNHFHGPIP 611
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Frame = +2
Query: 17 FVWCW-----CAPGLAAALILLFLPESPKFLLANKGPEAALPVLATMYEWNYGSGLKYPV 181
F W W P L + PESP+FL A+ VL M N ++ P
Sbjct: 213 FGWRWLLALSAVPSFVLLLFYVITPESPRFLCMKGRVTEAMDVLEKMARLN---NVQLPS 269
Query: 182 GR-ISTSNLD 208
GR +S N++
Sbjct: 270 GRLVSDKNIE 279
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 560 RKKDPLLWNNVRLWCCHGGSSVRAPRWGC 646
R P L + L CCH SSV RW C
Sbjct: 50 RSPAPRLSTTLPLACCHRVSSVYRSRWHC 78
>06_03_0741 -
24016204-24016298,24016408-24016525,24016805-24016903,
24016992-24017117,24017200-24017277,24017366-24017554,
24018186-24018338,24018785-24018898,24019576-24019761,
24019845-24019970,24020053-24020248,24020338-24020438,
24020533-24020610,24020707-24020952,24021063-24022253
Length = 1031
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 117 ASGPLLASRNFGLSGRNSRIKAAARPGAHQHQTNAR 10
A P SR + SR +A RP HQ+ T R
Sbjct: 22 AESPAAPSRGISTLAKGSRPRAPPRPAPHQYTTGRR 57
>05_07_0260 -
28739035-28739085,28739316-28739596,28740545-28740572,
28740653-28740749,28741216-28741272,28741353-28741415,
28741533-28741621,28741779-28741865,28742041-28742162,
28742245-28742500,28742595-28742744,28743120-28743278,
28743820-28743892,28743968-28744024,28744115-28744243,
28744469-28744560,28745220-28745252
Length = 607
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 89 FLLANKGPEAALPVLATMYEWNYGSGL 169
FLL K PE + L ++EW++ SGL
Sbjct: 314 FLLGYKDPEPSKANLPLLHEWHFRSGL 340
>04_04_1601 + 34707975-34708209,34708598-34709970
Length = 535
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 531 LAIGFFINKIGRKTLYCGIMFVCGVATVGAAFVPHGGAATALLIV 665
+A+GF +N++ + + +CG +V AF A +AL +V
Sbjct: 447 VALGFAVNRLTSGAVAMSFLSICGAVSVAGAFAAF-AAISALSVV 490
>03_05_1122 +
30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 665 DYEQGGGSPTVGHERCSHRGNTTDEHYSTVKGLSSDLVDEEADGE 531
D + GGG VG +R RG+ + ST + L S+ + D E
Sbjct: 20 DVDLGGGLTVVGRKRKDGRGSVDENGASTKRILRSNSMKMHVDAE 64
>01_07_0304 - 42628086-42628104,42628828-42630263
Length = 484
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +2
Query: 35 APGLAAALILLFLPESPKFLL 97
AP +A AL++L +PESP++L+
Sbjct: 136 APSVALALMVLAMPESPRWLV 156
>01_03_0126 + 12741397-12743022
Length = 541
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 8 RRAFVWCWCAPGLAAALILLFLPESPKFLLANKGPEAALPVLATMYEWNYGSG 166
R +VW A L+ L + ESP++LL + A+ + + N G G
Sbjct: 242 RNMYVWTSLPSLCYAVLLYLLVQESPRWLLVRGRKQEAIEAVRQIASLNGGGG 294
>09_04_0290 -
16429495-16429559,16430040-16430316,16430410-16430571,
16431308-16431926,16431976-16432172
Length = 439
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 289 ISHTSMFAVFMVSSGLYVWVPDILNSILRDSTDQNITIC 405
I S +V SG+++ DI+N ++R Q++TIC
Sbjct: 182 IIENSPLLEMLVLSGIFIDGDDIINWVIRAPNLQHLTIC 220
>07_03_0896 + 22373348-22374946
Length = 532
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 8 RRAFVWCWCAPGLAAALILLFL-PESPKFLLANKGPEAALPVLATMYEWNYGSGL 169
R ++W P L A++L FL ESP++LL A+ + + N G G+
Sbjct: 235 RSMYLWT-SLPSLGYAILLYFLVQESPRWLLVRGRKHDAIETVRQIAALNGGGGI 288
>04_04_1113 -
30986757-30986780,30986781-30987273,30987437-30987959,
30988361-30988615,30988812-30988926,30989026-30989078,
30989213-30989265,30989419-30989473,30989549-30989599,
30989776-30990024,30990122-30990350,30990994-30991305
Length = 803
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 128 VLATMYEWNYGSGLKY 175
+L M+ WNYGS LKY
Sbjct: 523 ILMVMFIWNYGSKLKY 538
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,166,070
Number of Sequences: 37544
Number of extensions: 596521
Number of successful extensions: 1939
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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