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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10d09
         (616 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0064 + 11062798-11063568,11064212-11064261,11064354-110645...    34   0.10 
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585     31   0.96 
03_06_0120 + 31804301-31804412,31804525-31804631,31804714-318047...    31   0.96 
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680           30   1.7  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   3.9  
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892...    28   5.1  
12_01_0353 - 2695457-2696028,2696147-2696264                           28   6.8  
09_04_0261 + 16207565-16207825,16207935-16208087,16208191-162083...    28   6.8  
04_04_1285 - 32382614-32382720,32383032-32383710,32383816-323839...    28   6.8  
12_01_0741 + 6649988-6653065                                           27   8.9  
07_01_0588 + 4370771-4370983,4371069-4371167,4371268-4371399,437...    27   8.9  
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572...    27   8.9  
02_05_0519 - 29708600-29709079                                         27   8.9  

>06_02_0064 +
           11062798-11063568,11064212-11064261,11064354-11064510,
           11064598-11064816,11065301-11065429,11066502-11068031,
           11068654-11069013,11069086-11069205,11069727-11069897,
           11070022-11070180,11070327-11070452,11070660-11070968
          Length = 1366

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +3

Query: 189 PKPGSGKVIVPPADCKPGPICYNPCVPRFHHG 284
           P P  G V+ PP     GP  Y P  P FH G
Sbjct: 54  PAPHHGVVVPPPMTSGGGPYSYPPATPPFHRG 85


>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
          Length = 268

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 177 CGCPPKPGSGKVIVPPADCKPGPICY 254
           CGC  +P   +V  PP  C P P CY
Sbjct: 232 CGCGIRPWPPQVWPPPPVCPPPPWCY 257


>03_06_0120 +
           31804301-31804412,31804525-31804631,31804714-31804756,
           31806069-31806187
          Length = 126

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 300 KYRNFTYFVLLPLIAIQSFN-ALGHEPPPKGPCRDYEYMRVRTKRFPWGDGV 452
           K+   TY  ++    + ++N + GH    + P   Y Y+ +R K FPW + V
Sbjct: 42  KWEKITYAGIVTCTLLAAYNLSKGHPHFDEPPA--YPYLHIRNKEFPWENAV 91


>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
          Length = 612

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 294 WKKYRNFTYFVLLPLIAIQSFNALGHEPPPK 386
           W KY +FTY+    LIA+Q    L    PP+
Sbjct: 547 WAKYTSFTYYCYRLLIAVQYSGRLARLLPPE 577


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +3

Query: 159 PPRPSKCGCPPKPGSGKVIVPPADCKPGP 245
           PP P K   PP P  G    PPA   P P
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPP 356


>01_06_0565 +
           30287253-30287502,30287522-30289010,30289133-30289277,
           30289679-30289729
          Length = 644

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 159 PPRPSKCGCPPKPGSGKVIVP-PADCKPGP 245
           PP PS    P  PG G    P P+D  P P
Sbjct: 261 PPSPSSGSSPTTPGGGGGYTPTPSDTPPSP 290



 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 159 PPRPSKCGCPPKPGSGKVIVP-PADCKPGP 245
           PP PS    P  PG G    P P+D  P P
Sbjct: 183 PPSPSSDTSPTTPGGGGGYTPTPSDAPPSP 212



 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 159 PPRPSKCGCPPKPGSGKVIVP-PADCKPGP 245
           PP PS    P  PG G    P P+D  P P
Sbjct: 209 PPSPSSDTSPTTPGGGGGYTPTPSDAPPSP 238



 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +3

Query: 159 PPRPSKCGCPPKPGSGKVIVP-PADCKPGP 245
           PP PS    P  PG G    P P+D  P P
Sbjct: 235 PPSPSSDTSPTTPGGGGGYTPTPSDTPPSP 264


>12_01_0353 - 2695457-2696028,2696147-2696264
          Length = 229

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 318 YFVLLPLIAIQSFNALGHEPPP-KGPCRDYEYMRVRTKRFPWGD 446
           +F+L+PLIA+ +  A+  +P P +  C   +   VR   FP  D
Sbjct: 6   FFLLIPLIALVTTQAMASDPSPLQDLCVADKNSPVRVNGFPCKD 49


>09_04_0261 +
           16207565-16207825,16207935-16208087,16208191-16208316,
           16208595-16208847,16209303-16209485,16209486-16209582,
           16209706-16209769,16209904-16210053,16210215-16210387,
           16210497-16210536,16211170-16211223
          Length = 517

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 162 PRPSKCGCPPKPGSGKVIVPPADCKPGPICYNP 260
           PRP+ C  P  PGS +  V P    PG   + P
Sbjct: 14  PRPACCRPPSSPGSRRGFVFPPRFAPGVFLFFP 46


>04_04_1285 -
           32382614-32382720,32383032-32383710,32383816-32383926,
           32384007-32384065,32384163-32384271,32384387-32384575,
           32384650-32385476,32385501-32385633
          Length = 737

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 159 PPRPSKCG-CPPKPGSGKVIVPPADCKPG 242
           P RP + G  PP+P   +V + PADC  G
Sbjct: 17  PKRPRRDGDAPPEPQPARVGLNPADCDLG 45


>12_01_0741 + 6649988-6653065
          Length = 1025

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 150  LCGPPRPSKCGCPPKP 197
            LCGPP   +CG P +P
Sbjct: 953  LCGPPLSKQCGYPTEP 968


>07_01_0588 +
           4370771-4370983,4371069-4371167,4371268-4371399,
           4372027-4372092,4372458-4372523,4372633-4372707,
           4373423-4373653
          Length = 293

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +3

Query: 150 LCGPPRPSKCGCPPKPGSGKVIVPPADCKPGP 245
           L  PP P      PKPG G +  P     P P
Sbjct: 97  LRAPPPPQVFHAQPKPGEGAMAAPQPQQPPAP 128


>05_05_0334 +
           24156532-24156565,24156681-24156782,24157145-24157274,
           24157361-24157445,24157525-24157666,24157762-24157894,
           24157993-24158254,24158331-24158519,24158596-24158721,
           24158809-24159195,24159288-24159398,24159629-24160423,
           24161114-24161255,24161350-24162518,24162609-24162818,
           24163010-24163478,24164037-24164464
          Length = 1637

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +3

Query: 441 GDGVKSFYHNEHVN 482
           GDG  SF++NEHVN
Sbjct: 325 GDGFLSFFNNEHVN 338


>02_05_0519 - 29708600-29709079
          Length = 159

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 165 RPSKCGCPPKPGSGKVIVPPADCKPGPICYNPCVPRFHHGKDTWKKYR 308
           R  + G PP+P +   +VP A   P P   N  VP        W++YR
Sbjct: 68  RRGRVGLPPRPPTSAPVVPQAR-MPTPTVQNSFVP-LPPNLAFWEEYR 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,901,663
Number of Sequences: 37544
Number of extensions: 399901
Number of successful extensions: 1337
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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