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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10c09
         (665 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...   220   7e-58
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...   218   3e-57
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...   211   3e-55
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...   206   1e-53
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...   200   8e-52
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760...   184   7e-47
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007...   153   1e-37
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593...    96   3e-20
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574...    30   1.9  
12_01_0915 - 8908643-8908756,8909086-8909203,8909570-8909682,891...    29   3.3  
08_02_1528 + 27666356-27667081                                         29   4.4  
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430...    29   4.4  
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034     28   5.8  
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708...    28   5.8  
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140...    28   5.8  
11_06_0284 + 21909758-21913645                                         28   7.7  
06_03_1237 + 28602250-28604196                                         28   7.7  
02_05_0552 - 29911280-29912541,29912633-29912762                       28   7.7  

>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score =  220 bits (538), Expect = 7e-58
 Identities = 112/186 (60%), Positives = 139/186 (74%), Gaps = 4/186 (2%)
 Frame = +1

Query: 109 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 282
           S    + +EE V  AKLAEQAERY++M   M++V +T    EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279

Query: 283 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 456
           ARR+SWR+ISSIEQK E  G+E +  + KEYR K+E EL +IC  +L LLD HL+P ++ 
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339

Query: 457 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLA 636
           PESKVFYLKMKGDYYRYLAE  TG  R    E++  AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 399

Query: 637 LNFSVF 654
           LNFSVF
Sbjct: 400 LNFSVF 405


>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score =  218 bits (533), Expect = 3e-57
 Identities = 110/186 (59%), Positives = 140/186 (75%), Gaps = 4/186 (2%)
 Frame = +1

Query: 109 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 282
           S+   + +EE V  AKLAEQAERY++M   M++V +T    EL+ EERNLLSVAYKNV+G
Sbjct: 2   SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61

Query: 283 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 456
           ARR+SWR+ISSIEQK E  G+E +  + K+YR K+E EL +IC  +L LL+ HL+P ++ 
Sbjct: 62  ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121

Query: 457 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLA 636
           PESKVFYLKMKGDYYRYLAE  TG  R    E++  AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 181

Query: 637 LNFSVF 654
           LNFSVF
Sbjct: 182 LNFSVF 187


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score =  211 bits (516), Expect = 3e-55
 Identities = 108/181 (59%), Positives = 134/181 (74%), Gaps = 4/181 (2%)
 Frame = +1

Query: 124 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 297
           + +EE V  AKLAEQAERY++M   M++V +T    EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1   MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60

Query: 298 WRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 471
           WR++SSIEQK EG  +E    + KEYR K+E EL +IC  +L LLD HL+P ++  ESKV
Sbjct: 61  WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120

Query: 472 FYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSV 651
           FYLKMKGDY+RYLAE  TG  R    E +  AY+ A +I+ A + PTHPIRLGLALNFSV
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSV 180

Query: 652 F 654
           F
Sbjct: 181 F 181


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score =  206 bits (503), Expect = 1e-53
 Identities = 108/185 (58%), Positives = 133/185 (71%), Gaps = 4/185 (2%)
 Frame = +1

Query: 112 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 285
           S     +EE V  AKLAEQAERY++M   M++V +T    EL+ EERNLLSVAYKNV+GA
Sbjct: 2   SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61

Query: 286 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNP 459
           RR+SWR+ISSIEQK E  G+E      KEYR ++E EL +IC  +L LLD HL+P A+  
Sbjct: 62  RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121

Query: 460 ESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLAL 639
           ESKVFYLKMKGDY+RYLAE  +G  R    E++  AY+ A +I+ A +  THPIRLGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLAL 181

Query: 640 NFSVF 654
           NFSVF
Sbjct: 182 NFSVF 186


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score =  200 bits (488), Expect = 8e-52
 Identities = 103/182 (56%), Positives = 130/182 (71%), Gaps = 7/182 (3%)
 Frame = +1

Query: 130 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 294
           +EE+V  AKLAEQAERY++M   M++V        G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10  REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69

Query: 295 SWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESK 468
           SWR++SSIEQK EG  +      A+ YR +VE EL  IC  +L LLD+ L+P A+  ++K
Sbjct: 70  SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129

Query: 469 VFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFS 648
           VFYLKMKGDY+RYLAE  TG  R    + +  AYQ A +I+  ++ PTHPIRLGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189

Query: 649 VF 654
           VF
Sbjct: 190 VF 191


>11_06_0036 +
           19474848-19475188,19475696-19475774,19475880-19476002,
           19476970-19477086,19477169-19477228
          Length = 239

 Score =  184 bits (447), Expect = 7e-47
 Identities = 91/147 (61%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
 Frame = +1

Query: 220 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 393
           G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG       A  + YR K+E EL
Sbjct: 18  GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77

Query: 394 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQ 573
             IC  +L LLD HL+P A   ESKVFYLKMKGDY+RYLAE  +G+ R    E +  AY+
Sbjct: 78  ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137

Query: 574 DAFEISKAKMQPTHPIRLGLALNFSVF 654
            A +I+ A + PTHPIRLGLALNFSVF
Sbjct: 138 AAQDIALADLAPTHPIRLGLALNFSVF 164


>11_06_0360 -
           22699524-22699529,22699865-22699899,22700650-22700792,
           22701165-22701220,22701367-22701454,22702737-22703037,
           22704365-22704428
          Length = 230

 Score =  153 bits (371), Expect = 1e-37
 Identities = 71/149 (47%), Positives = 101/149 (67%)
 Frame = +1

Query: 127 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 306
           ++E++V+ AKLAEQAERYDDM   MK +    V++S EER L SV +K  +GARR+SWR+
Sbjct: 3   EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62

Query: 307 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 486
           + S+EQK    ++       Y+ KVE ELR +C +VL ++  H +P A++ E+ VF+ KM
Sbjct: 63  LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122

Query: 487 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 573
           KGDYYRYLAE +TG  + +  + S  AYQ
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151


>01_01_0767 +
           5931031-5931281,5931414-5931594,5932020-5932129,
           5932212-5932360,5932686-5932738,5933168-5933260
          Length = 278

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
 Frame = +1

Query: 187 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 360
           M  AM  V +    L+ EERNLLSV YKN++GA+R++ R+I SIE  ++T+G E   +  
Sbjct: 1   MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60

Query: 361 KEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRH 540
            EYR KVE E+ +IC DV+ ++DK                  KGDYYRYLAE  TG  + 
Sbjct: 61  AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKI 102

Query: 541 SVVEDSQKAYQ 573
            V E S  AY+
Sbjct: 103 EVSELSLNAYE 113


>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
            25457561-25457740,25457823-25458017,25459059-25459157,
            25459508-25460137,25460250-25460591
          Length = 1440

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
 Frame = +1

Query: 133  EELVQRAKLAEQAERYDDMAAAMKE--VTETGVELSNEERNLLSVAYKNVVGARRSSWRV 306
            + ++ R   A   +  DDM A MKE  +    + L  E+R L  +  K +   ++     
Sbjct: 941  QSMIGRMNRANSIQEIDDMIA-MKEKIIAHESISLKEEKRLLQDI--KELKAQKKQLSSN 997

Query: 307  ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK-HLIPKASNPESKVFYLK 483
            + S  +  E  E+K+ + ++ ++ ++K+   +  ++  L DK   I KA + E       
Sbjct: 998  MGSKAEMGEAFEQKEHIHEQQKI-LKKDSDVLLTNLKSLEDKTRFIKKAFDDER------ 1050

Query: 484  MKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 594
               D  R L E    +  H V    QKAY + FE+ K
Sbjct: 1051 ---DALRKLTE--EHQAAHEV---RQKAYDEWFELKK 1079


>12_01_0915 -
           8908643-8908756,8909086-8909203,8909570-8909682,
           8911138-8911218,8911307-8911357,8912173-8912232,
           8913353-8913419,8913509-8913759
          Length = 284

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
 Frame = +1

Query: 370 RVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVV 549
           RVK +  + EI      L  KH   K  +PES+  ++K+   Y     E   G+  +++ 
Sbjct: 63  RVKQDANVSEIKKAYYKLSLKHHPDKNPDPESRKLFVKIANAYEILKDESTRGQYDYAIA 122

Query: 550 EDSQKAYQDAFEISKAKMQPTHP--IRLGLALNFSVF 654
              +  Y  A          T P  + +GL L  S F
Sbjct: 123 HPEEVFYNTAQYYRAYYGHKTDPRAVLIGLLLIISAF 159


>08_02_1528 + 27666356-27667081
          Length = 241

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
 Frame = +1

Query: 115 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 294
           T  V K+      K A   +    +   + E  E  + +     +LLS   K +  +  S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186

Query: 295 SWRVISSIEQKTE-GSERKQQMAKEYRV 375
            W ++S   QKT    + +Q  A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214


>01_05_0487 +
           22641133-22642182,22642276-22642863,22642961-22643068,
           22643582-22643692,22643784-22643849,22644858-22644917,
           22644990-22645119,22645159-22645547,22645783-22645902,
           22645957-22646022,22646190-22646255
          Length = 917

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
 Frame = +1

Query: 106 PSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 282
           P   +  D E++ ++  K AE  ER +      KE     ++ SNEE   L   +KN   
Sbjct: 327 PHYRVEEDGEKIKLEEIKGAESVERINFEERITKEEKNEAMKSSNEEVVSLVTGWKN--- 383

Query: 283 ARRSSWRV-ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLD 429
            R   W V +   ++ T     K+  AK  + +   +LR     +LG +D
Sbjct: 384 -RIEEWDVDVDENDKDTRKLTPKRDPAKVDKAEKYTDLRSPICCILGHVD 432


>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
          Length = 930

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = +1

Query: 388 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 492
           +LRE+ YD+   LD+ L+  A+ P S     K+   K+KG
Sbjct: 71  DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110


>07_03_1647 +
           28370226-28370369,28370452-28370611,28370704-28370831,
           28372512-28372628,28372729-28372782,28372985-28373075,
           28373517-28373688,28374452-28374573,28374726-28374817,
           28375331-28375373,28375596-28375656,28376367-28376515,
           28376659-28376729,28376805-28376975,28377056-28377124,
           28377427-28377528,28377629-28377697,28378060-28378138,
           28378238-28378337,28378438-28378513,28378715-28378894,
           28379430-28379552,28379634-28379717,28380068-28380252,
           28380339-28380477,28380585-28380644,28380926-28381030,
           28381332-28381445
          Length = 1019

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 235 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYD 411
           N +  LLS AY N+       W + ISS+ Q+   S      ++ Y+  + K L +    
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348

Query: 412 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV-ATG 528
            L ++D  L+    + +SK      KGD  RY+  V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388


>02_05_0699 +
           31013176-31013345,31013749-31013872,31013950-31014032,
           31014106-31014217,31014297-31014401,31014809-31014859,
           31015893-31015979,31016325-31016402,31016477-31016530,
           31016608-31016892
          Length = 382

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
 Frame = +1

Query: 124 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 285
           V+ + L +R++L++    Y ++ A   E+T     E+       +ERN +  +Y N    
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309

Query: 286 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 378
           +RSS         K   S+  Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340


>11_06_0284 + 21909758-21913645
          Length = 1295

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/88 (22%), Positives = 41/88 (46%)
 Frame = +1

Query: 136 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 315
           +L +  +  E+ + ++     ++E+T+ G E   EE+N          G +    +    
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461

Query: 316 IEQKTEGSERKQQMAKEYRVKVEKELRE 399
            E+K +G  R+++  +E+  K EKE  E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488


>06_03_1237 + 28602250-28604196
          Length = 648

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 17/72 (23%), Positives = 36/72 (50%)
 Frame = +1

Query: 418 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKA 597
           GL+D +      +  SKVFY   + + Y Y + +A G   H    ++   +++   +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370

Query: 598 KMQPTHPIRLGL 633
            ++P H   +G+
Sbjct: 371 NVEPNHVTFIGV 382


>02_05_0552 - 29911280-29912541,29912633-29912762
          Length = 463

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 55  SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 201
           S T       H   SP+PSS     +EEL++R +L AE  +R   M AA+
Sbjct: 50  SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,187,838
Number of Sequences: 37544
Number of extensions: 372140
Number of successful extensions: 1188
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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