Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc10c01
         (254 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1451 + 37451004-37451113,37451422-37451661,37451765-374518...    25   6.4  
05_01_0217 + 1630083-1630205,1630467-1630710,1631695-1632508,163...    25   8.4  

>01_06_1451 +
           37451004-37451113,37451422-37451661,37451765-37451846,
           37452159-37452200,37452285-37452344,37453020-37454663,
           37454763-37454864,37455846-37455986,37456077-37456202,
           37456376-37456543
          Length = 904

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +3

Query: 201 GIPFLSGFYSKDLILKKK 254
           G P +SGF + DL+LK+K
Sbjct: 51  GAPSISGFEAMDLLLKEK 68


>05_01_0217 +
           1630083-1630205,1630467-1630710,1631695-1632508,
           1632775-1632844,1633007-1633239,1633345-1633564
          Length = 567

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 217 DKKGIPHKDKFEIFKHKEVKGIYK 146
           +++GIP K    + KH EVK I K
Sbjct: 230 EREGIPCKHILSVLKHLEVKEIPK 253


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,588,756
Number of Sequences: 37544
Number of extensions: 36137
Number of successful extensions: 48
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 14,793,348
effective HSP length: 63
effective length of database: 12,428,076
effective search space used: 260989596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)