Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0173
(376 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0665 - 18506221-18506271,18506331-18506401,18507097-185071... 31 0.22
11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555... 29 0.90
03_06_0034 + 31197846-31198417,31198562-31198987,31199074-311993... 29 1.2
02_01_0129 - 934865-935152,935241-935490,935965-936105,937175-93... 29 1.6
12_02_1275 - 27482784-27483272 28 2.1
09_04_0361 - 16948740-16948860,16948951-16949018,16949424-169495... 28 2.1
06_03_0685 - 23499779-23500204 28 2.1
04_03_0489 + 16503325-16503747,16503916-16503978 28 2.7
03_05_0896 - 28592658-28593331,28594069-28595455 28 2.7
09_06_0293 + 22086359-22086496,22086604-22087213,22087407-220879... 27 3.6
07_01_0547 + 4052618-4052659,4055575-4055741,4055839-4056556,405... 27 3.6
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 27 3.6
04_04_0407 - 24983491-24983575,24983655-24984015,24984367-249844... 27 3.6
03_05_0373 + 23581812-23583293 27 3.6
03_05_0057 + 20350971-20351405 27 3.6
01_06_0997 + 33676441-33676758,33678223-33678314,33678443-336785... 27 3.6
01_01_1225 - 9894899-9895333 27 3.6
11_05_0087 + 18970741-18972702 27 4.8
09_04_0301 + 16498346-16498501,16498805-16499274,16500023-16500131 27 4.8
09_02_0425 + 9167684-9167803,9168034-9168108,9168200-9168653,916... 27 4.8
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 27 4.8
05_03_0408 + 13601576-13601748,13601795-13602104,13602597-136028... 27 4.8
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 27 4.8
04_03_0771 + 19434460-19434987 27 4.8
01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855 27 4.8
09_04_0032 - 13953323-13955269 27 6.3
07_01_0533 + 3942813-3943164,3943244-3943458 27 6.3
06_03_1310 + 29238644-29240260 27 6.3
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 27 6.3
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821... 27 6.3
05_04_0303 - 20010761-20011756 27 6.3
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002 27 6.3
04_01_0314 - 4243928-4244361,4245178-4245415 27 6.3
03_04_0163 + 17865529-17865801,17866030-17866102,17866251-17866270 27 6.3
08_02_1499 - 27558872-27559015,27559544-27559666,27560214-275603... 26 8.4
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 26 8.4
06_03_0786 - 24579722-24580137,24580518-24580590 26 8.4
02_03_0079 + 14914035-14914160,14917101-14917361 26 8.4
01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735 26 8.4
>04_03_0665 -
18506221-18506271,18506331-18506401,18507097-18507169,
18507476-18507805
Length = 174
Score = 31.5 bits (68), Expect = 0.22
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 167 WKWCGLRRDQTGREG 211
W WCGLRR + GR G
Sbjct: 65 WMWCGLRRSKAGRRG 79
>11_04_0460 -
17955102-17955146,17955253-17955310,17955442-17955593,
17955888-17955993,17956101-17956222,17956766-17956834,
17956969-17957214,17957331-17957373,17957449-17957520,
17957954-17958066,17958158-17958238,17958343-17958415,
17959413-17959519,17960410-17960514,17960684-17960974,
17961621-17961707,17961774-17961842,17961917-17961973,
17962057-17962155,17962223-17962312,17962395-17962511,
17964164-17964244,17964353-17964502,17964812-17964956,
17967359-17967510,17967647-17967784,17967838-17967914,
17968032-17968134
Length = 1015
Score = 29.5 bits (63), Expect = 0.90
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 141 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFSLCLG 305
SSS S+Y N +G +T +++ SG +S S +S+ D E L LG
Sbjct: 781 SSSSSRYSNSSGTIFQKTSVQKRLSSGSSSSSKNKRSTAVVMSSPDCELDLLLLG 835
>03_06_0034 +
31197846-31198417,31198562-31198987,31199074-31199386,
31199510-31199560
Length = 453
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 262 AERLLPGALRDAPSPE*TFSTCLVSTESTPF 170
++RL+ ALR PSP F++ L +TPF
Sbjct: 39 SQRLVYAALRSLPSPRALFASLLSQLSATPF 69
>02_01_0129 -
934865-935152,935241-935490,935965-936105,937175-937707
Length = 403
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 253 NAQLC-RLRTPSVSRCAWAPGLCGGPDVP 336
NA C R P V+ +WAP CGG VP
Sbjct: 75 NAWNCPRNSRPPVAALSWAPARCGGGAVP 103
>12_02_1275 - 27482784-27483272
Length = 162
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 164 QWKWCGLRRDQTGREG 211
+W W GLRR +TGR G
Sbjct: 144 RWVWRGLRRTKTGRRG 159
>09_04_0361 -
16948740-16948860,16948951-16949018,16949424-16949510,
16949626-16949694,16949786-16949854,16949944-16950765
Length = 411
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 364 PLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERL 251
P + S +GH +HHR + A E DR + L
Sbjct: 44 PFCMLTSSSRGHAEHHRNGGGGGEHRREAGEGDRPKAL 81
>06_03_0685 - 23499779-23500204
Length = 141
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 184 PSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAP 309
P R R RR+ P GR+ LP ++CR R P R P
Sbjct: 42 PPRGGRIRRWPPRRGRIRGLPPLGGRICR-RPPRGGRIHGLP 82
>04_03_0489 + 16503325-16503747,16503916-16503978
Length = 161
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 244 PAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSA 351
PAA A L RLRTP+ + C G P V H A
Sbjct: 49 PAAAACLRRLRTPATAACLRRAGNPRPPPVSPHKGA 84
>03_05_0896 - 28592658-28593331,28594069-28595455
Length = 686
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 310 GLCGGPDVPAHGSAPPGGVPG 372
GLCGGP P G P PG
Sbjct: 222 GLCGGPLGPCPGEVSPSPAPG 242
>09_06_0293 +
22086359-22086496,22086604-22087213,22087407-22087938,
22088617-22089151
Length = 604
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 164 QWKWCGLRRDQTGREG 211
+W W GLRR +TGR G
Sbjct: 558 RWVWRGLRRIKTGRRG 573
>07_01_0547 +
4052618-4052659,4055575-4055741,4055839-4056556,
4056678-4057114,4057241-4057315,4057490-4057673,
4057759-4057854,4057952-4058018,4058556-4058715,
4058808-4059199,4059254-4059300
Length = 794
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -1
Query: 364 PLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSP 218
P R ++R + + P HS+K S +P LRD SP
Sbjct: 662 PPRPTKARSNSSRSSSKAPGAVHSQKFSKIANSGLNEEMPDILRDDASP 710
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 27.5 bits (58), Expect = 3.6
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -2
Query: 375 PAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPT-ELSVCCRERSETPRHRNKPSRP 199
P H R IR + + P R+ R P + R RS PR R P R
Sbjct: 297 PIRHGGTPSRRPGSPIRRRSPSPPPRRLRSPRHLSPRRDRGSPIRRRSPLPRRRLTPPRR 356
Query: 198 VWS 190
+WS
Sbjct: 357 MWS 359
>04_04_0407 -
24983491-24983575,24983655-24984015,24984367-24984406,
24984466-24984468
Length = 162
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 360 SGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRER 238
SG + ++ IRT+ RP T + +R PK +S R +
Sbjct: 36 SGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNK 76
>03_05_0373 + 23581812-23583293
Length = 493
Score = 27.5 bits (58), Expect = 3.6
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = -2
Query: 369 GHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWS 190
GH G+ R D RR G+ R SV ETPR R R VW
Sbjct: 162 GHQDGKVRVWRADAGDPAVHRRVGSL--PRLADYVRSSVNPSSYVETPRRRRGRRREVWL 219
Query: 189 RRS 181
R S
Sbjct: 220 RHS 222
>03_05_0057 + 20350971-20351405
Length = 144
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 234 LSAPGSKRSALSASDAECFSLCLGAGP 314
LS+P + R AL D EC S AGP
Sbjct: 74 LSSPKAAREALKVHDPECCSRSPSAGP 100
>01_06_0997 +
33676441-33676758,33678223-33678314,33678443-33678540,
33678824-33678979,33679106-33679731,33679826-33679896,
33679987-33680241,33680337-33680454,33680595-33680766,
33680854-33681395
Length = 815
Score = 27.5 bits (58), Expect = 3.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 164 QWKWCGLRRDQTGREG 211
+W+W GLRR + GR G
Sbjct: 64 RWEWHGLRRTKAGRRG 79
>01_01_1225 - 9894899-9895333
Length = 144
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 352 VQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGA 239
V + + H+ H R P+P + K S ++A A R LP A
Sbjct: 55 VVAAHRRHRRHRRSPSPPDA-KRSTADATVAPRFLPAA 91
>11_05_0087 + 18970741-18972702
Length = 653
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 370 RAPLRAVQSREQGHQDHHRGP---APRHSEKHSASEADRA 260
RAP R + R H++H RG P S +H ++ RA
Sbjct: 57 RAPRRPLHGRHGHHREHRRGADELEPAGSPRHHRGQSVRA 96
>09_04_0301 + 16498346-16498501,16498805-16499274,16500023-16500131
Length = 244
Score = 27.1 bits (57), Expect = 4.8
Identities = 21/81 (25%), Positives = 31/81 (38%)
Frame = +3
Query: 132 LNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFSLCLGAG 311
L C + + G G E + E G G A S R A+ A A+ + L A
Sbjct: 2 LTCIACSKQPGGGGGEPLHEPPEDEDAVDGGGGGGGATPSTRLAIKALTAQIKDIALKAS 61
Query: 312 PLWWS*CPCSRLCTARRGARR 374
+ PC+ +A +RR
Sbjct: 62 GAYRHCKPCAGSSSAAGASRR 82
>09_02_0425 +
9167684-9167803,9168034-9168108,9168200-9168653,
9168735-9168784
Length = 232
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 244 PAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSA 351
P Q R P++ RC+W P L PA S+
Sbjct: 82 PTRRGQQQRRHAPALRRCSWEPLLALAAAAPARDSS 117
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 27.1 bits (57), Expect = 4.8
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -1
Query: 370 RAPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAE---RLLPGALRDAPSPE 215
R+PLR RE+G +R P+PRHS S +E R + RL G RD P+
Sbjct: 482 RSPLRY---RERGG---YRRPSPRHSRSRSPAEHQRRDVRNRLRSG--RDGGGPD 528
>05_03_0408 +
13601576-13601748,13601795-13602104,13602597-13602834,
13603014-13603364,13603457-13603542,13603685-13603759,
13604241-13604542,13605359-13605622,13606032-13606806
Length = 857
Score = 27.1 bits (57), Expect = 4.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 178 WTPSRPNRSRRFIPVTG 228
+ P+RP R RRF+P+ G
Sbjct: 716 YPPNRPTRCRRFVPLPG 732
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 27.1 bits (57), Expect = 4.8
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -1
Query: 373 RRAPLRAVQSREQGHQDHHRGPAPRHSEKHS--ASEADR 263
R L A SR Q HH P+ RH S EADR
Sbjct: 15 RERELDAEASRRSKEQQHHHHPSGRHQRGDSDPRCEADR 53
>04_03_0771 + 19434460-19434987
Length = 175
Score = 27.1 bits (57), Expect = 4.8
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = -1
Query: 373 RRAPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCL 194
R A +RE+ HHRG A + +H+ + R LP P P ST
Sbjct: 70 RAGEAEADSTREEAEHGHHRGRAGGEARRHTVV---LSRRSLPPESSPPPPPSPEPSTAA 126
Query: 193 VS 188
V+
Sbjct: 127 VA 128
>01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855
Length = 152
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 360 SGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRER 238
SG + S+ IRT+ RP T + R PK +S R +
Sbjct: 26 SGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVSAPGRNK 66
>09_04_0032 - 13953323-13955269
Length = 648
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 310 GLCGGPDVPAHGSAPPGGVP 369
GLCGGP P ++PP P
Sbjct: 222 GLCGGPLSPCTNTSPPSPSP 241
>07_01_0533 + 3942813-3943164,3943244-3943458
Length = 188
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 241 LPAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAP--PGGVPGG 375
LPAA C ++TP S+C+ P PA +AP P P G
Sbjct: 102 LPAA----CNVKTPPASQCSTVGVPMPSPATPATPAAPAVPSETPAG 144
>06_03_1310 + 29238644-29240260
Length = 538
Score = 26.6 bits (56), Expect = 6.3
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Frame = -2
Query: 375 PAGHPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRH----RNKP 208
PA P +C A + ++A+ T TRRP + RS P H R P
Sbjct: 339 PAQRPPAQCAAAAAHPFDCSKAQCQATPPTTRRPGGR--TPLAPHRSPLPHHMPPRRTPP 396
Query: 207 SRPVWSRRSPHH 172
+ P S +P H
Sbjct: 397 TPPPPSSPTPSH 408
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -1
Query: 367 APLRAVQSREQGHQDHHRGPAP----RHSEKHSASEADRAERLLPGALRDAPSP 218
APL A + +D +R P P + +K +A E+ R + + PG +R++ +P
Sbjct: 45 APLAAASNSGSPSKDSNRSPPPPSKKKKKKKKAADESGRWKSVPPG-MRESAAP 97
>05_04_0347 +
20479682-20479753,20480136-20480813,20481143-20482195,
20482345-20482406,20482491-20482541,20482635-20482719,
20483253-20483342,20483472-20483563,20483704-20483728
Length = 735
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 123 IQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGS 251
+QQ N + ++ Y+G+G DS +T E V + D AS S G+
Sbjct: 89 LQQQNQQTELNLDYSGDGSDSSQTG--EDVPTADQASPSGSGT 129
>05_04_0303 - 20010761-20011756
Length = 331
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 286 VSRCAWAPGLCGGPDVPAHGSAPPGGVPGG 375
+S+ P L D+P HG GGV GG
Sbjct: 26 LSQSLITPDLAVAFDIPTHGGGGGGGVGGG 55
>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
Length = 877
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 328 QDHHRGPAPRHSEKHSASEA 269
+DHHR PR + SASEA
Sbjct: 714 EDHHRSKRPRTTTTSSASEA 733
>04_01_0314 - 4243928-4244361,4245178-4245415
Length = 223
Score = 26.6 bits (56), Expect = 6.3
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +3
Query: 102 LSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASDA 281
L K L + N S+ ++ +N +E ++ Y GDG + P S RSA + S
Sbjct: 156 LRKARALWRMSNASAGVTSKHN-----HMEEQERVAPYGGDGFQVRTPRSTRSAFT-SQL 209
Query: 282 ECFSLCLGAGPLWW 323
G WW
Sbjct: 210 LASPTAARLGRRWW 223
>03_04_0163 + 17865529-17865801,17866030-17866102,17866251-17866270
Length = 121
Score = 26.6 bits (56), Expect = 6.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 164 QWKWCGLRRDQTGREG 211
+W W GLRR + GR G
Sbjct: 49 RWMWRGLRRTKAGRRG 64
>08_02_1499 -
27558872-27559015,27559544-27559666,27560214-27560312,
27561257-27561307
Length = 138
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 348 RAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSET 229
+AV + + T AR+ G A +P P +VCC + ET
Sbjct: 17 KAVKTNSISFTSARK-GNAFLRLQPVPMRFAVCCAAKKET 55
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 271 LRTPSV-SRCAWAPGLCGGPDVPAHGSAPPGGVPG 372
++TP+V + A P + P+ P + PPG +PG
Sbjct: 442 VQTPTVLPQTAATPAITNDPNPPPYPLFPPGLIPG 476
>06_03_0786 - 24579722-24580137,24580518-24580590
Length = 162
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 164 QWKWCGLRRDQTGREGL 214
+W W GLRR + GR G+
Sbjct: 144 RWMWRGLRRMKDGRRGM 160
>02_03_0079 + 14914035-14914160,14917101-14917361
Length = 128
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 301 WAPGLCGGPDVPAHGSAPPGGVPGG 375
W P C P P+ + PPG GG
Sbjct: 86 WGPFHCLYPAPPSSSTPPPGAASGG 110
>01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735
Length = 637
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 312 ARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHH 172
AR P R+ P+ + + +R TP R KPS P RSP H
Sbjct: 242 ARSPPLRRDV--PELFKEAKSSSKRFSTPPPRRKPSSPPAPSRSPPH 286
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,324,160
Number of Sequences: 37544
Number of extensions: 237507
Number of successful extensions: 1014
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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