Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0109
(721 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0668 - 4882174-4884204 356 1e-98
07_01_0075 - 558829-560859 353 1e-97
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 79 5e-15
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 44 2e-04
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 39 0.003
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 38 0.008
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 33 0.30
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 33 0.30
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 32 0.40
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 32 0.40
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 32 0.53
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 31 0.70
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 30 1.6
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 30 1.6
03_03_0153 - 14910420-14910769,14910946-14911008,14911084-149113... 30 1.6
01_03_0056 + 12089404-12090300,12090429-12090581,12090999-120911... 30 2.1
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 29 2.8
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 29 2.8
08_02_1310 - 26037025-26038074 29 4.9
07_03_0615 + 19983003-19983238,19983297-19983558,19983651-199839... 29 4.9
03_02_0921 + 12414932-12416569 28 6.5
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 28 6.5
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 28 8.6
04_03_0589 - 17604361-17604800,17604887-17604949,17605025-176052... 28 8.6
>06_01_0668 - 4882174-4884204
Length = 676
Score = 356 bits (875), Expect = 1e-98
Identities = 159/210 (75%), Positives = 189/210 (90%)
Frame = +3
Query: 90 PTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKL 269
P KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF+++LS +I +FP+L
Sbjct: 13 PPGKDFIDIILSRTQRQTPTVVHKGYSISRIRQFYMRKVKYTQSNFYEKLSTVIDDFPRL 72
Query: 270 DDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQLKRA 449
DD+HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYGDSLYRCK LK A
Sbjct: 73 DDIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYGDSLYRCKCLKVA 132
Query: 450 ALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRAD 629
ALGRM T++KR +L YLEQ+RQH+ARLPSIDP TRT++ICG+PNVGKSSF+NKITRAD
Sbjct: 133 ALGRMCTVIKRISPSLAYLEQIRQHMARLPSIDPNTRTLLICGYPNVGKSSFMNKITRAD 192
Query: 630 VEVQPYAFTTKSLYVGHTDYKYLRWQVIDT 719
V+VQPYAFTTKSL+VGH DYKYLR+QVIDT
Sbjct: 193 VDVQPYAFTTKSLFVGHADYKYLRYQVIDT 222
>07_01_0075 - 558829-560859
Length = 676
Score = 353 bits (867), Expect = 1e-97
Identities = 158/210 (75%), Positives = 188/210 (89%)
Frame = +3
Query: 90 PTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKL 269
P KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF+++LS +I +FP+L
Sbjct: 13 PPGKDFIDIILSRTQRQTPTVVHKGYAISRIRQFYMRKVKYTQSNFYEKLSTVIDDFPRL 72
Query: 270 DDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQLKRA 449
D +HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYGDSLYRCK LK A
Sbjct: 73 DGIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYGDSLYRCKCLKVA 132
Query: 450 ALGRMATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRAD 629
ALGRM T++KR +L YLEQ+RQH+ARLPSIDP TRT++ICG+PNVGKSSF+NKITRAD
Sbjct: 133 ALGRMCTVIKRISPSLAYLEQIRQHMARLPSIDPNTRTLLICGYPNVGKSSFMNKITRAD 192
Query: 630 VEVQPYAFTTKSLYVGHTDYKYLRWQVIDT 719
V+VQPYAFTTKSL+VGH DYKYLR+QVIDT
Sbjct: 193 VDVQPYAFTTKSLFVGHADYKYLRYQVIDT 222
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 78.6 bits (185), Expect = 5e-15
Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Frame = +3
Query: 252 QEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRC 431
+ FPK D+HP+ L+ + + + +Y+ + +++ R I++V K + + SL +
Sbjct: 143 ENFPKRRDLHPYERSLIELTFGEGYYEKVIARVDALRKKINSVGKQHASVC--AKSLTKR 200
Query: 432 KQLKRAALGR--MATIMKRQGANLTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSF 605
+ +R + GR + + + L + + L +P +DP+ T+ + G PNVGKSS
Sbjct: 201 EAEERLSEGRKKLEEAFEHGKWVIDDLVNIAKTLRSMPVVDPHIPTLCLVGSPNVGKSSL 260
Query: 606 INKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDT 719
+ ++ EV Y FTT+ + +GH + R+QV DT
Sbjct: 261 VRILSSGKPEVCSYPFTTRGILMGHIVSNHERFQVTDT 298
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 570 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVID 716
+ GFP+VGKS+ +NK+T EV Y FTT + G YK + Q++D
Sbjct: 80 LVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYKGAKIQLLD 128
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 570 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYK-YLRWQVID 716
+ G PN GKS+ ++ ++RA E+ YAFTT +G Y+ Y +V D
Sbjct: 344 LVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVAD 393
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 564 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYKYLRWQVID 716
+ + GFP+VGKS+ + +T E Y FTT + G Y + Q++D
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQYNDTKIQLLD 115
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 504 LEQVRQH--LARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTT 659
LE VR+H L R + + G+ N GKS+ +N++T ADV + F T
Sbjct: 234 LESVRKHRKLYRNRRQSVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFAT 287
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 576 GFPNVGKSSFINKITRADVEVQPYAFTT 659
G PNVGKS+F N +T+ + + + F T
Sbjct: 3 GLPNVGKSTFFNIVTKLSIPAENFPFCT 30
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 552 YTRTIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTK-SLYVGHTDYKYLRWQVIDT 719
Y I I G PNVGKSS +N + D V P + TT+ ++ T ++++IDT
Sbjct: 372 YIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDT 429
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 564 IIICGFPNVGKSSFINKI---TRADVEVQPYAFTTKSLYVGHTDYKYLRWQVIDT 719
+ I G PNVGKS+ N++ RA V +P T LY G + + + VIDT
Sbjct: 163 VAIIGRPNVGKSALFNRLVGGNRAIVVDEP-GVTRDRLY-GRSYWGDREFMVIDT 215
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 570 ICGFPNVGKSSFINKITRADVEVQPYAFTT 659
+ G PN GKS+ ++ IT A ++ Y FTT
Sbjct: 281 LVGLPNAGKSTLLSAITLARPDIADYPFTT 310
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 504 LEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADV-EVQPYAFTTK 662
L V + ARL S D ++ G+PNVGKSS IN + V +V P TK
Sbjct: 300 LLSVLRQFARLKS-DKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETK 352
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 561 TIIICGFPNVGKSSFINKITRADV 632
T+ I G PNVGKSS IN + R+ V
Sbjct: 270 TVGIVGLPNVGKSSLINSLKRSRV 293
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 555 TRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 677
T +++ G PNVGKS+ IN I R P K VG
Sbjct: 136 TLLVMVVGVPNVGKSALINSIHRIVTSRFPVQDKNKRATVG 176
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 555 TRTIIICGFPNVGKSSFINKITR 623
T T+++ G PNVGKS+ +N + R
Sbjct: 135 TGTVLLVGIPNVGKSAIVNAMHR 157
>03_03_0153 -
14910420-14910769,14910946-14911008,14911084-14911339,
14911432-14911522,14911798-14912096,14912177-14912295,
14922536-14922594,14922676-14922965,14923052-14923567,
14923634-14923936
Length = 781
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 606 INKITRADVEVQPYAFTTKSLYVGHTDYKYLR 701
++++T A +E QP+ +T+ LY H D + R
Sbjct: 527 VHRVTFAPLEQQPHVASTRDLYARHRDQDFAR 558
>01_03_0056 +
12089404-12090300,12090429-12090581,12090999-12091157,
12091575-12091734,12092185-12092201,12092682-12092798,
12092914-12093303
Length = 630
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 159 KHYK--ISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYK 332
K YK +S G+Y+ KV + +S + FP +D P ++ N L+D+ K
Sbjct: 423 KRYKELLSDSEGYYVPKVIDELSSKKVLMSEFVPGFP-IDKTDPNWS---NFLFDEPTRK 478
Query: 333 LGLGQLNTARHLIDNVAKDYVRLL 404
L AR DY+R++
Sbjct: 479 FNLIDFGAARDFPKRFVDDYLRMV 502
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 570 ICGFPNVGKSSFINKITRADVEVQPYAFTT 659
I G PN GKS+ + I+ A + Y FTT
Sbjct: 457 IVGAPNAGKSTLLTAISAAKPTIANYPFTT 486
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 570 ICGFPNVGKSSFINKITR 623
I G+PNVGKSS IN++ +
Sbjct: 405 IVGYPNVGKSSLINRLLK 422
>08_02_1310 - 26037025-26038074
Length = 349
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 303 NVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMA 467
++L + Y+LG +L + + L+DNV + V + Y C +LK+ L +A
Sbjct: 260 HLLAAAERYELGGLKLLSTKKLLDNVTPENVAGIIVCAETYGCPELKKKCLDYLA 314
>07_03_0615 +
19983003-19983238,19983297-19983558,19983651-19983906,
19983982-19984044,19984131-19984570
Length = 418
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 612 KITRADVEVQPYAFTTKSLYVGHTDYKYLR 701
++T A +E QP+ +T+ LY H D + R
Sbjct: 136 RVTFAPLEQQPHVASTRDLYARHRDQDFAR 165
>03_02_0921 + 12414932-12416569
Length = 545
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 495 LTYLEQVRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVE--VQPYAFTTKSL 668
L L ++++ + P I YT TI++ GF VG++ I V + P FT +L
Sbjct: 253 LDLLNKLKESPKQTPDI--YTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNAL 310
Query: 669 YVGH 680
GH
Sbjct: 311 LNGH 314
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 561 TIIICGFPNVGKSSFINKI 617
T+I+ G PNVGKS+ N++
Sbjct: 84 TVILVGRPNVGKSALFNRV 102
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 180 IRGFYIRKVKYTQQNFHDRLSRIIQEFPKLD-DVHPFYADLMNVLYDKDHYKLGLGQLNT 356
+ Y+ +V+ ++ + LSR+ QEF +L +L V ++ LGQL+
Sbjct: 361 LEDLYLSQVQQRKET-EESLSRVQQEFEQLKIQQDEVTVELQRVNEQNENL---LGQLSD 416
Query: 357 ARHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMATIM 476
+R + + ++ +LL+ D+ R + R G+M +++
Sbjct: 417 SREHFEWLLSEHDQLLRERDNAVREVEELRQKRGQMLSVL 456
>04_03_0589 -
17604361-17604800,17604887-17604949,17605025-17605280,
17605373-17605634,17605739-17605885,17606118-17606236,
17606373-17606531,17606911-17606947,17607023-17607174
Length = 544
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 612 KITRADVEVQPYAFTTKSLYVGHTDYKYLR 701
++T A +E QP+ +T+ LY H D + R
Sbjct: 262 RVTFAPLEQQPHVASTRILYARHRDQDFAR 291
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,672,690
Number of Sequences: 37544
Number of extensions: 421648
Number of successful extensions: 1020
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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