Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120077.Seq
         (775 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0803 + 24737115-24737366,24738921-24739004,24739152-247392...    31   1.0  
04_03_0680 - 18613901-18614528,18614766-18615265                       29   3.1  
02_02_0225 + 8051203-8052618                                           29   4.1  
10_08_0005 + 14030414-14030519,14030612-14030921,14031012-140312...    28   7.2  

>06_03_0803 +
           24737115-24737366,24738921-24739004,24739152-24739255,
           24739321-24739445,24739549-24739707,24740120-24740237,
           24740317-24740851,24740948-24741042,24741153-24741431,
           24741478-24741592,24741669-24741855,24741934-24742490
          Length = 869

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = -1

Query: 520 YCLDSNFTRTDGRAKALLGGESEGTMEAAIKRSIL 416
           +CLDS+  RT  R K L+   ++G+ ++ + +S++
Sbjct: 492 FCLDSSLNRTKARGKILICHRAKGSSDSRVSKSMV 526


>04_03_0680 - 18613901-18614528,18614766-18615265
          Length = 375

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +2

Query: 182 YPPKFHFTPFGGNLPRLPDRCSKACDGIQPQNHFPL 289
           +P +     +G  +P LP+  +K C  + P+++FP+
Sbjct: 26  FPTRTQGDSYGALIPGLPEDLAKVCLALVPRSYFPV 61


>02_02_0225 + 8051203-8052618
          Length = 471

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -3

Query: 425 IDSTRALASKLRLASHRARKSTNSLWTYNAIKHSHIGEAVDFGTDKGGSDSE 270
           ++ TR LA+ L ++ H        LW       SH GE+ DF TD    D E
Sbjct: 261 VEQTRELAAGLEMSGH------GFLWVVRM--PSHDGESYDFATDHRNDDEE 304


>10_08_0005 +
           14030414-14030519,14030612-14030921,14031012-14031233,
           14031326-14031565,14031727-14031804,14031841-14032036,
           14032084-14032265,14032351-14032433,14032526-14032650,
           14032762-14032840,14032924-14033092,14033171-14033231,
           14033312-14033434,14033552-14033749,14033927-14033995,
           14034244-14034320,14034475-14034562
          Length = 801

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 382 LIERENQPILFGHITRSNTVILEKQWILEPIK 287
           L   + + ILF HI R+ T +L+ QW   PI+
Sbjct: 51  LANNKRKYILFSHIMRNGTNLLDFQWSPFPIQ 82


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,821,463
Number of Sequences: 37544
Number of extensions: 424360
Number of successful extensions: 984
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)